Ruditapes philippinarum (Manila clam): 132717260 Help Entry 132717260         CDS       T09557                                  Name (RefSeq) collagen alpha-2(IV) chain-like   KO K06237   collagen type IV alpha Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi04512   ECM-receptor interaction rphi04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:rphi00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132717260  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     132717260  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:rphi04147]     132717260    00536 Glycosaminoglycan binding proteins [BR:rphi00536]     132717260 Exosome [BR:rphi04147]  Exosomal proteins   Exosomal proteins of other cancer cells    132717260 Glycosaminoglycan binding proteins [BR:rphi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132717260 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  132717260 NCBI-ProteinID:  XP_060556677 LinkDB All DBs Position Unknown AA seq 1751 aa AA seqDB search FQQQRNRSETQPECGGCTTNNGCKCVGEKGSRGFPGLPGPQGPQGNTGFEGPEGLIGPKG IKGEPGSTGIHGPKGDRGKMGMPGFPGISGIPGLQGPPGPRGPAGLDGCNGTQGEPGVAG RPGEPGTEGIPGFDGVKGQKGEPGTAVAGFKGQKGESGPSGIPGAPGLNGNDGLPGQPGD IGPRGYTGPPGLPGNPGQKGNMGINYKPEKGDKGARGPKGIPGPPGTTKLPFTGNNETLQ GAKGERGMKGQKGEAGPYGPRGFPGADGQPGRIGEPGMHGEKGVPGIAGPRGKQGLPGIP GFTGPKGDSGEDGLPGLSGLPGMKGERGYTGMKGNVGPRGPQGPPGGPGGGDGQVGDPGP PGPRGPSGEDGLPGLPGARGENGIQGPRGGPGIPGPPGPQGNDGPEGEKGEMGLQGFPGL DGLPGQPGYPGAKGEQGFKGEAGRSIPGEPGRPGEPGRDGFPGAKGDSGPRGLPGLPGNS SVGRTGLPGQKGERGLPGNSGLDGLPGPAGRDGPKGEIGGSCNLCQNGYKGEKGEAGLPG RPGLSGERGPEGPVGPKGEAGLDGLPGQQGLQGVPGEKGLPGLQGIPGEPGKDAFVPIDI LTPPKGEPGEPGINGLNGERGPPGPQGPRGPQGFAGIQGEKGTPGVDGMPGRPGMKGESG IPGKKGEPGFGMPGAAGERGEPGQPGLPGLPGMKGDKGMAGETIFIGNELKGAKGDRGPA GPPGLPGLDGLPGSDGSSGEPGLPGLDGLPGRPGEPGLDGRPGEPGPRGLTGVRGDKGAV GVAGLPGFDGPQGEPGVPGLPGLQGLKGEPGIPGNAVVGPKGEPGINGEPGAPGLDGRKG DRGMPGLDGLPGMKGNPGLNGAPGLDGRPGLKGEPGPIGPRGLSGEPGEPGLPGLPGAVG FKGEPGLPGVPGLQGGKGDIGESGFSGRDGLPGLDGAPGPRGPDGDDGLPGLSGPKGEVG VVGFPGEPGRDGLPGLPGVRGSKGERGFPGRDGEPGLSGRPGEKGDNGVPGLPGMDGEPG LSGLPGMKGDRGLPGLSGQPGSRGFDDLSSLICEPQRFPGMKGEQGLPGIGQPGERGFPG EPGRDGLDGLPGNAGAKGDAGVPGFPGMKGERGVDGLPGNSGLPGLDGLPGMKGNAGLPG RPGEPGAPGDDGLPGLDGVPGAKGEPGLPGRSGLPGLDGMKGERGFPGPEGPSGEPGLPG MKGDSGLPGLPGLQGRKGDSGFPGEPGRDGFKGEPGFPGRDGEPGVPGEKGDRGFNGLAG RKGEPGRDTVGQKGEEGPRGLPGLDGLRGQKGEPGPSGRDGFPGAKGEPGIPGEGLPGMK GEPGFPGREGEPGLRGEPGQDGLPGAPGRKGDRGEPGLPGLRGEDGLTGLPGEKGEPGIP GVPGLPGMKGEPGLNGINGPQGPKGDSGFPGRNGLKGDRGFPGEKGMKGDPAPLNVVKGA KGEPGPEGFPGVNGLPGPRGEPGEPGFPGARGPQGDIGVPGYPGMKGEEGARGFDGRPGL DGLDGPRGPQGLQGIPGKAGYVPPVGFLMTKHSQSRNVPTCPDGMGKMWEGYSLLYVEGN ERSHHQDLGWAGSCIRRFSTMPFLFCGTDNVCNYASRNDKSYWLSTNAPMPMMPVGETDI PPYISRCVVCDAPSNVMAVHSQTLTIPDCPIGWNGLWIGYSFVMHTGAGPSGGGQALSSP GSCLEDFRATPFIECNGARGTCHFFANKYSFWLTTIGENQQFRVPVSETLKAGDLRSRVS RCQVCAKVVRG NT seq 5256 nt NT seq  +upstreamnt  +downstreamnt tttcagcagcagcggaatcggtcggagactcagccggaatgtggcggttgtacgacaaat aatggatgtaaatgtgtcggagagaaaggatcaagaggttttccaggactcccagggccg cagggtcctcagggaaacactgggtttgagggaccagaagggctgattggacctaaaggc attaaaggtgaaccaggctcaacaggtatccacggtcccaaaggtgacagaggtaaaatg ggtatgccaggatttccaggtatcagcggtattccaggtttgcaaggtcccccaggtcca agaggtccagcaggtcttgatggatgtaatggaacacagggagagcctggtgtggcaggt cgaccaggtgagccgggaaccgagggtatcccaggttttgatggagttaaaggtcaaaag ggggaaccaggaacagctgtagcaggatttaaaggacaaaaaggagagtctggaccttct ggaatcccaggtgcaccaggtctgaatggtaatgatggactaccaggacagccaggtgac atcggaccacgtggatatacaggtcccccaggtcttccaggtaaccccggtcagaaaggt aacatgggtatcaattacaagccagagaagggagataaaggagccagggggcctaagggt atccctggaccaccaggaacaacgaaattaccatttaccggaaacaatgagacattgcaa ggtgctaaaggtgagaggggtatgaaagggcagaaaggagaggctggtccttatggaccc cgtggtttcccaggagcagacggacaaccaggtcgtattggagaaccaggtatgcatgga gaaaagggtgtcccaggaattgctggtccgaggggtaaacaaggtttgccaggtatccca ggatttacaggacctaagggtgacagcggtgaagatggactaccaggtttatccggtttg ccaggtatgaagggagaaagaggttacactggcatgaagggtaatgttggaccaagagga ccccagggacccccaggtggacctggaggtggtgatggacaagttggtgacccaggaccg cccggacctagaggtccaagtggagaagatggacttccaggattaccaggtgcacgaggt gaaaacggaattcaaggccctagaggaggacccggtattccaggcccaccaggaccccag ggaaatgatggacctgagggagaaaaaggcgaaatgggtcttcaaggatttcctggattg gatgggttaccaggacaaccaggttaccctggtgctaaaggtgaacaaggtttcaaagga gaagcaggtcgttcaattcctggagaaccaggtcgtcctggtgaaccaggacgtgatgga tttcccggagcaaaaggagattccggtccacgtggtctacctggattgccaggaaattct tcagtgggtcgtactggcttacctggacagaaaggagaaaggggcctcccaggtaattct ggtctagatggtttaccaggtcccgctggacgtgatggtccaaaaggtgaaattggtgga agctgtaacctgtgtcagaatggttacaaaggagaaaagggagaagctgggttgccagga cgacctgggttgtccggagagcgtggaccagagggacctgttggtcctaaaggagaagct ggacttgatggtttgcctggtcaacaaggacttcaaggagtacccggagagaagggattg cctggattacagggaattccaggagaaccagggaaagatgcatttgttccgattgatatt cttacaccaccaaagggagagcctggagagccaggtattaatggtctgaatggagaacgt ggacccccaggaccccagggtcctagaggaccacagggttttgctggaatccagggagaa aagggtacacctggtgtcgatggcatgccgggacgtccaggtatgaagggtgagtcaggt attcctggtaagaagggagaaccagggtttggtatgcctggtgcggcaggagagcgcggg gaacctgggcaaccaggtttgccaggacttccaggaatgaagggtgacaagggtatggca ggtgaaactatctttattggaaatgagcttaaaggagctaaaggtgacagaggccctgct ggtcccccaggattgccaggactggatggtctaccaggatcggatggctcatccggggaa ccaggtctgccaggccttgatgggttaccaggacgaccaggggaaccaggattagatgga agaccaggagagccgggacccagaggtttgaccggtgtgagaggagataagggagctgtt ggtgttgctgggctgccaggatttgatggaccgcagggagagccaggcgtgccaggtctg ccaggccttcaaggattgaagggtgaacctggtataccaggaaatgcagtagtaggacca aaaggtgaaccaggaatcaacggagaaccaggcgctccaggattggatggacgaaagggt gaccgaggaatgcctggtctagatgggttacctggcatgaaaggaaaccctggtttgaac ggagcacctggtcttgacggcaggcccggactgaagggagagcccggaccgattggacca cgaggattgtctggtgaaccaggagaacccggattacccggactaccaggagctgtagga tttaagggtgagcctgggttaccaggggtacccggacttcagggtggtaagggtgatatt ggagagagtggatttagtggtagggatggtttacctggtctggatggagctcccggaccc agaggccccgatggtgacgatggactcccaggactttcaggaccaaagggcgaggttggt gttgtaggattccctggagaacctggacgtgatgggctgccaggattgccaggtgttcgt ggatcaaagggagaacgtggcttcccaggacgtgacggtgaacccggactttctggacga ccaggagagaagggcgacaatggagtaccaggtttaccagggatggacggggaaccagga ctatcaggtttaccaggaatgaaaggtgaccgaggactaccaggtcttagtggacaacca ggaagcagaggatttgatgatttatcaagtttaatttgtgaaccccaaaggtttccaggt atgaagggtgaacaaggtcttcctggcatcggtcagcctggtgagagaggtttccccggg gaaccaggtcgtgacggacttgacggtttaccaggaaatgccggagcaaagggagatgct ggagttcccggattccctggaatgaagggggaacgaggagttgatgggttaccaggcaac tcaggacttccaggtctggatggattacctggaatgaaaggaaacgctggtttaccaggt agaccaggggagccaggtgccccaggtgacgacggacttcctggtctcgatggtgtgcca ggtgctaaaggggaaccaggacttccaggacgctctggactacccggtttggatggcatg aagggtgagagaggattcccaggaccagagggaccatcaggtgaacccggtttaccagga atgaagggtgatagtggacttccaggtttgccaggtcttcaaggacgcaagggagattca ggcttcccaggggaaccaggtcgtgatggtttcaagggtgagcctggattcccaggacgt gatggggaaccaggagtacctggggagaagggagacagaggttttaatggtttagctgga cgaaagggagagccaggacgtgatactgttggccagaagggtgaggaaggtccaagaggt ctgccaggtttagacggtcttagaggccagaagggtgaaccaggacctagtggacgagat ggattcccaggagctaaaggagaaccaggtataccaggagagggtcttccaggaatgaag ggagaacctggcttcccaggcagagagggagagccaggattaagaggtgaacccggacaa gatggcttacctggtgctccaggacgtaaaggtgatcgtggagaacccggtcttcccgga cttcgaggtgaagatggtctcacaggtctacctggtgaaaaaggtgaacctggtatccca ggagtccccggtctgccaggcatgaagggagaaccaggtttgaacggtattaatggacca caaggacctaaaggtgacagtggattccctgggcgtaatggactaaagggagatagaggt ttccctggagaaaaaggaatgaaaggtgaccctgctccactgaatgttgtaaaaggtgca aaaggtgagcccggacctgagggtttcccaggagtcaacggtcttccaggcccgcgcgga gaaccaggagagccaggattccctggtgcacgtggacctcaaggtgatattggtgtccca ggttatccaggaatgaagggagaagagggagctagaggttttgatggtcgaccaggctta gacggtcttgatggtcctcgaggtccgcagggtcttcagggtataccaggtaaagcgggt tacgtaccaccggtcggtttcttaatgacgaaacacagtcagtcgagaaacgtacctaca tgtccagacggtatgggtaaaatgtgggaaggttacagtctgttatatgttgaaggaaac gagagatcacatcatcaagatttaggttgggccggctcctgtatacgcagattcagtacg atgcctttcttattctgtggtacggacaacgtatgtaactacgctagcaggaacgacaaa tcttactggctgtcgacaaacgccccgatgccaatgatgcctgttggggagaccgacatt cctccatacatcagtcgatgtgtcgtctgcgatgctccctctaatgtaatggctgttcac agtcagacgcttactattccagattgtccgattggttggaatggtctttggatcggatac agcttcgtcatgcacactggtgcaggaccgagtggaggaggtcaagcgttatctagtcct ggtagttgtttagaagatttccgtgctactccgtttatagaatgtaacggtgctagaggc acctgtcatttctttgctaataaatacagtttctggctgacaacaataggagaaaatcag caatttagagtacctgtatcggagactcttaaagcgggagatcttcgttcacgcgtcagt aggtgtcaagtttgcgccaaggttgtccgaggataa

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