Ruditapes philippinarum (Manila clam): 132717360
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Entry
132717360 CDS
T09557
Name
(RefSeq) transcription elongation factor SPT4-like
KO
K15171
transcription elongation factor SPT4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132717360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132717360
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132717360
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
132717360
RNA polymerase I system
132717360
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
132717360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
132717360
NCBI-ProteinID:
XP_060556792
LinkDB
All DBs
Position
Unknown
AA seq
118 aa
AA seq
DB search
MSVETVPKDLRNLRACLLCSLVKTFDQFEMDGCDNCDEYLHMKNNNGAVYECTSSNFDGM
VAMMGPEDSWVAKWQRIERFVKGCYALSVTGRLPPGIIRSLKNKNIPYRPRDVSYKNT
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgaaactgtccctaaagatttaagaaatttgcgagcatgtttattgtgctct
cttgtgaagacatttgaccaatttgagatggatggttgtgataattgtgatgaatattta
catatgaagaacaataatggtgctgtttatgaatgtacaagttcaaattttgatggaatg
gttgccatgatgggtccagaagatagctgggtggcaaaatggcaaagaattgagcgattt
gtgaaaggatgctatgcactgtctgtgacaggccggttaccaccaggaatcatcagaagt
ttgaaaaataaaaacattccatatagacccagagatgtttcatacaaaaacacttaa
DBGET
integrated database retrieval system
