Ruditapes philippinarum (Manila clam): 132717559
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Entry
132717559 CDS
T09557
Name
(RefSeq) trafficking protein particle complex subunit 11-like
KO
K20308
trafficking protein particle complex subunit 11
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132717559
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
132717559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun
Gryzun-like
TRAPPC10
Motif
Other DBs
NCBI-GeneID:
132717559
NCBI-ProteinID:
XP_060557029
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MSWANNLPEELLCRPTGQVILTGLDVTYNAVHKSIWDSFCNNRRPDRVPLQFQVVPGDHE
YPKCRTNKRQSYEWYIPKGILKSTWMKKHLTQVPAVVVVFYDLDWDEHMWKEKQMECSTR
VEIVRNSLQGRGTKVSVVLIQKNAPLPPGEDVVAAERAASLCSACDLSAKNLYVLPQTDH
LIGYTIRLENAFYELSQAYYHGEARKVKSHKDFLNKTTHQLLFVRHQFKVAFFNEMKQDT
HTAIKHYKQAYGHILELRMYDTNMLEIKTIAGFINYKICRLSFQHNAPLDGIAQFRKHID
FFKSKIGIADLAFEHSAWMSKQFQVFGDLFDEAIKLGLTAIQTQHPGFYYQQAANHAIAR
KQLCRGLCKPTQEKIDPEITDGLKSLDFYGQRPWRQGLQSIDPPDLQKEKEGIVALQCLE
LKEDHSWLIIPLLNSAVAQFKKYKSLRMKRYLMVQMGQEYFHAKDYQRSLMLLSKVTWDY
RGERWWPLLTSILTTSLKCAYLTGKIQDYVINCVELIGPYTTCPADEKTRIQMNLLRVMS
NDAPEAEPGLETACVEKARNFWNPVIEPCVFNVEMQNIVPCVECKARFTSATVAADQEVE
VEVYLRVRCPFPVRFSKVSISLNNPMYNQYLEVIDGHGISAASESESKEGNLYLVPGTPR
CYKFTFLPVQEDVGSQLEITGVCVVMGSETARCAVMTWVGAGGDAVTPIQTALTLLPRKQ
GKHTIEWDQIEIDQSTKIVSRPAKVDIDLHHEAPSLQNEFYLIQATVTNREDVAISNVVM
SVSIPEREESDKSTHLSLEHAEFDGRVVSQLSYIDLGTMQKGDVQNKSIFVKCLQTGSKH
ITFQVEYNIDVTADNHVIPCACVKTEIINLATVSAFEVSVKLMNMKFETIEAIQAEEPFL
LMPELKCTSPWAVDIQDSDLHLSQCIEKADMTQSQLQGVCLKKSECAAECFCLTSMNSVQ
TSVSLGSYVLHWKRHKDESITLDHPSVTSLFSLPTVTIEHIPLSVELKLPAHGSMKCLLP
VCYVLHNRTGYPQEVEVNMEASDSFMFSGNKQVHFRLLPGKPYEMTYNLFPLVAGHVALP
KMHLNMLRYPGTMDPIVQKMLPTHIFIKPLGKVPPGEK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaaataatctaccagaggagttactgtgtaggccaacaggtcaagtgata
ttgactggtcttgatgttacatacaatgctgtacacaaatctatatgggactcattttgt
aacaacaggcgaccagaccgtgttcccttacagtttcaggttgtccctggagaccatgag
tacccaaaatgtagaactaataagagacagtcctatgagtggtatattcctaaaggtata
ttgaagtcaacatggatgaagaaacatttgacccaggtaccagctgttgttgttgttttt
tatgatcttgattgggatgaacatatgtggaaagaaaaacaaatggagtgttctactaga
gtagaaattgtcaggaatagtttacaaggtagaggaacaaaagtgtcagttgtgttgata
cagaaaaatgcaccgctgccccctggtgaggatgttgtagctgcagaaagggcagcatca
ctgtgtagtgcatgtgatttgtcagccaaaaatctgtatgtcctaccacagactgaccat
ttaattggctacacaataaggttagagaatgccttctatgagttatcacaagcatattat
catggtgaggcaagaaaggtgaagtcacacaaagatttcctcaataaaactacacatcag
ctattgtttgtaagacaccagtttaaagttgctttcttcaacgagatgaaacaggatact
catacagctatcaaacattacaagcaagcatatggtcatatactggagctgagaatgtat
gatacaaacatgctggaaattaaaactattgctggatttatcaactacaagatatgtaga
ttatcattccaacacaatgccccgctggatggtatagcccaatttaggaagcatattgac
ttcttcaagagtaaaataggaatagctgatctggcatttgagcacagtgcctggatgtct
aaacagttccaggtatttggagatttatttgatgaggctatcaagctaggattgacagct
atacagacacaacatccaggattctactaccagcaagcagcaaaccatgctattgccagg
aaacaactgtgtagagggctctgtaagccaactcaagagaaaatagaccctgagataact
gatggtcttaaatcattggatttctatggacaaagaccctggaggcaaggacttcaaagt
atagatccaccagatttacagaaagagaaggaagggatagtggcattacaatgtctagag
ttgaaagaagatcattcttggctgataattccattattaaacagtgctgttgcccagttc
aagaaatacaaatccttgagaatgaagcgatatctgatggttcaaatgggacaagaatat
ttccatgccaaagattatcaaagatctcttatgttattaagtaaggtgacatgggattat
agaggagagagatggtggcctttactgacctccatacttacaacatcactaaagtgtgcc
tacctgactgggaaaatacaggactatgttataaactgcgttgaacttattggaccttat
acaacatgtccagctgatgaaaagacgagaattcagatgaatctgttaagagttatgtct
aatgatgcccctgaagcagaacctggcttagaaactgcctgtgttgagaaggccagaaat
ttctggaatcctgtgatagaaccctgtgtattcaatgtagaaatgcaaaatattgtaccc
tgtgttgaatgtaaggcacgatttacaagtgctacagtggcagctgaccaggaagttgag
gtggaggtatatctacgggtcagatgtccatttcctgtcagattctctaaagtcagcatc
tcactcaataaccctatgtataatcagtacttagaagtgattgacggccatgggatatct
gctgcctctgaatcagaaagtaaagaaggaaatttatacttggtacccggcactccaaga
tgttataaatttactttccttcctgttcaagaggatgtagggagccaacttgagataaca
ggtgtatgtgtggtgatgggatcagagactgccaggtgtgctgtcatgacctgggttggt
gccggtggtgatgctgttacaccaatacaaactgcactgactctgttacctaggaaacaa
ggaaaacatacaatagaatgggaccagattgagattgatcaatcaacaaagattgtatca
agaccagcgaaagtggacattgacttacatcatgaagcaccaagtctacagaatgagttt
tatcttatacaagctactgtcaccaacagagaggatgtagctatcagtaatgtagtcatg
tcagtcagtataccagaaagggaggagtcagacaaatctacacatctaagcttagagcat
gcagagtttgatggtagagttgtttcccagctttcttacattgatctgggaaccatgcag
aaaggagatgttcagaacaagtctatttttgtgaaatgtctacagactgggtccaaacat
attacgttccaggtagagtacaatattgacgtgacagctgataaccatgtgataccctgt
gcgtgtgtgaagacagaaatcattaacctggctactgtcagtgcgtttgaagtgtcggtc
aaactcatgaatatgaagtttgagactatagaggctatacaagcagaagaaccattcttg
ttgatgccagaactaaagtgtacctcaccatgggcagttgatatacaagacagtgattta
catctgtctcagtgtatagagaaggcagacatgactcaatcacagttacaaggagtgtgt
ttaaagaagagtgaatgtgctgctgaatgcttctgtctgacctcgatgaattctgtacaa
acatctgtgtcacttggaagctatgtcctacattggaaaagacataaggatgaaagtata
accttagatcacccgtcagtgacaagccttttctctctaccaactgttaccatagaacac
atacctctatctgtggagctcaaacttcctgcccatggtagcatgaagtgtctgttacct
gtgtgctatgttctgcacaaccggacaggatacccacaagaagtggaggttaacatggaa
gctagtgattcttttatgttctctggaaacaaacaggtacactttagactgttgccaggt
aaaccttacgagatgacatataacctcttcccattggttgctggtcatgtggcccttccc
aagatgcacctgaacatgttgagatatccgggaacaatggatcctattgtacaaaagatg
ttaccaactcatatttttatcaagcctctaggtaaagtgccacctggtgagaaataa
DBGET
integrated database retrieval system
