Ruditapes philippinarum (Manila clam): 132717850
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Entry
132717850 CDS
T09557
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132717850
04121 Ubiquitin system [BR:
rphi04121
]
132717850
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132717850
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132717850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
132717850
NCBI-ProteinID:
XP_060557406
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MATDSNVEQIKLKNPPKKLKSKVWEHFGFREGQETDKATCKICFTDVSYPKSGSTSNLMQ
HMKRKHDVDLFGKHDMPSSAKRSVCNLPANQLKLTEMKGKVTAERSQTISTAIAGYLACD
MRPYSTVQNEGFRNMIHVLEPRYKLPSRTHFSEKVIPALWKKVEDRVRKRLQTADSIAIT
TDSWTSRATENYVAVTAHFINSNWQVENYTLETKLFSDSHTAENLASGLHDTVTSWQLER
NGKGPAISTDNASNIVRAVKDSGLSPHVGCFAHTLNLATQRGLKVSQVDRLLGRVRRVVT
FFHKSTSATSILKVMQEKLDLPNHKLLMDVPTRWNSSFDMCERYLEQQAAVYATLLEVKK
SVKDIVTLSESDVQNIEEVIKILKPLKTVTTLMCSQKHPTVSLIHPLKEMLLRQLEVLPS
DNMLVSDIKSAISNDLKPRYTDENILGFLLQASALDPRFKSLPYLDDRSRCAVYDNIQSA
AELLQSDSSCQNVTVKSEPDETPTSSQASEATTIDVPVLPSLSTLGEGEPPLKVKKETED
SDCKSNSCALADLFGDVFVTKVEPAKSSVDRVRAELVSYKEEACLPLNSDVSNPLLWWKE
KEDKYPLLSRYAKQLLCVPATSVASERVFSTAGDVVTAQRACLTGDQVNMLVFLKQNIII
PDDLL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgacagcaatgttgaacaaataaaattgaaaaatccccctaaaaaattaaaa
tcaaaagtttgggaacactttgggtttcgggaaggccaggaaacggataaagctacatgc
aaaatatgctttacggacgtgtcgtatccaaagtctggcagtacatctaatctcatgcag
cacatgaaacgaaaacacgatgtggacttgtttggtaagcatgacatgcctagttcagca
aaaaggtctgtttgtaatttacctgctaatcagttgaaattgacagaaatgaaagggaaa
gtgactgcagaaaggtctcagacaatttctacagcaatagctgggtatttggcatgtgat
atgcgcccatacagtactgttcagaatgaaggcttccggaacatgattcatgttttggaa
ccaagatacaaacttcctagccgcacacatttcagtgaaaaagtcattcctgcactgtgg
aaaaaggttgaagatagggtaaggaagcggcttcaaactgcagactccattgccataacc
actgactcatggacatctcgagccacagaaaattatgtagctgtaactgcccattttatt
aatagcaactggcaggttgaaaattacactcttgaaacaaaattatttagtgattctcat
acagctgaaaatttggcaagtggtctacatgacacagtaacatcctggcaacttgaacgc
aatggcaaaggtcctgctatatctactgacaacgcaagtaatattgttcgtgctgttaag
gactcgggtttgagtccacatgttgggtgttttgcccacacgttgaatctagcaacacaa
cgtggactgaaagtttcacaagttgacagacttttgggtagggtgaggcgtgtggtaaca
ttctttcataaaagcacttctgctactagtattttgaaggtaatgcaggagaaacttgat
ctccctaatcacaaactactaatggatgttccaaccaggtggaattcaagttttgatatg
tgtgaacgctatttagagcaacaggcagctgtatatgctacattgcttgaagtgaaaaag
agtgtcaaagacatagtaacattatcagaaagtgatgtgcagaacatagaggaagtgatc
aaaattttaaaaccacttaaaactgtaacaactcttatgtgtagccagaaacatcctact
gtgtcactgatacaccccctaaaggaaatgctgttacgacaacttgaggtcttgccttct
gacaacatgttggtatcagacataaaatcagcaatcagcaatgatctcaagccaaggtat
actgatgaaaacattttggggttccttctacaagcttctgccctggatccacggtttaag
agtctaccttacttggatgatagatctaggtgtgcagtatatgataatatacaatcagca
gcagaattactacagagtgactcaagctgtcagaatgtgactgttaaaagtgaacctgat
gagacacccacatctagccaggctagtgaggctactaccattgatgtaccagtactccct
tcattatccacactgggggaaggagaaccaccacttaaagtaaagaaagaaactgaagac
tctgattgtaaatcaaatagttgtgcactggcagatttatttggtgatgtgtttgtgact
aaggttgagcctgctaaatcatctgttgacagagttagagcagagcttgtttcttacaag
gaggaagcttgtcttcctttgaactctgatgtcagtaatcctctgttatggtggaaagaa
aaggaagataaatatcctttgctttcaagatatgcaaagcaactactatgtgttccagct
accagtgttgccagtgaaagagtgttctctactgctggtgatgtagtaacagcacagagg
gcatgccttactggtgaccaagttaacatgcttgtatttctgaagcaaaacattataatc
ccggatgacctgttataa
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