Ruditapes philippinarum (Manila clam): 132717994
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Entry
132717994 CDS
T09557
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132717994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132717994
03036 Chromosome and associated proteins [BR:
rphi03036
]
132717994
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132717994
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132717994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
LIM
Menin
Motif
Other DBs
NCBI-GeneID:
132717994
NCBI-ProteinID:
XP_060557587
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MFGANKPTGFGTPFASGTATPGFGSTFGQSTPSAGGGLFGQSAAGTSTGTGLFGGSGGSA
FGTQSTGFNFGATPSSSGGLFGQKTTANTGLFGTPAAASTSNAFGGFGGAAPAFGGTTTT
STAAGGLFGTTNNAGTGLFGSSPAFSQQPQAGTTVKYNPPQGQDTMVKNGVTQNITTKHQ
CITAMKEYEGKSLEELRMEDYAAGRKGKQAGATSGFGGFGTPAAAATQPTGFAFGQAKPT
GFGASTGFGTNTSTGGGSLFGQPTAQASTGGGLFGQTNKPLFGAATTTTQSGFGFGTNTS
TGTGGLFGQAQQNKPLFGTTTTTQPSLFGTGTSTFGQPAASGAGFGGFGTSQAGGLFANK
PAFGAQATSTAGFGGFANSNSGANLFAKPFSAPTPGFGFNTATTSSGFGATQPFGAAKPA
GFGLTTTATPSFNFAAGNTAGTSMFGNTLNKPGALGTFGTNTTTGFGGFNTANTGLGGAA
PTLGGTVNSTGVNPAVQIQQTLLALSQSPYGDSPLFWNMKDSKTKREEVLKPTNPVAQKA
LLANQHKVSPRPMAKIRPKALSGALNGSKSQIFEGLEEDDFSFGSDTFQPRKSVKKLTIK
KVGQDSNTPSRASSVSGEPPNVSSLRDEEHFRGRSSPVAYSGERRQDTDVPETENIIRSK
GISDQMADTPDRRPNMDDTIAMLNAQNKATSNREPVSSGTREPGQDDTVNISIISRDESI
NDDVIDERPMTPPPPHPAGIVLSRPGYYTIPSTEALAEMVDEDGNCFVEDFTIGREGYGS
IFFPGTTNIANMNFDETVFFRRKEVIVYPDDDNKPDVGDGLNKKAEITLDCVWPRDKSIG
TPIKSPEKLKSMRWQEKIEENSLKVGAKFIDYRPETGSWVFEVKHFSKYGLVDDSDEEDM
PEQDKKRLRLAQEQQIAVQKQKLHLEKQKQLDASKTGASLTHAGAGRQVAKFTVGPDEDS
DGSGTMRTEVPMGDDDNQISEPSQGGTSEIVGELDDEDFDIADEQPSSHRLATSMGVDAR
NMQVMKASFFGDEDAPVPAFDGSMFSKKQGSQIGSPLLRQVDSPSLFSSSLKSKYMSPVK
IVNVPQKEISKEKSLFSPRLITPEPIRATRSPQTFHPPVKEYMLLESGMTPQDYQQRVVG
ARVEKVIPTITESFTHMKQKLLVDAGMFMGRSFRVGWGPGWTLAHCGDIVQPKDSEEEKP
TNTFSLFAGGQKRSPTQGETRWNVHLQKINIADHIQSIDKTVIQNHREMLEIQLVHSRST
REGNCPVFTPSVGVEALHQYAERNQDELETLGSHPDEASVKHMGMVWDLCVALWGNMPEF
KDTDVERDSYLYHNARREAFTRWLSSVSADIIREEVQESKYKDQGHLQAILSCLTGHQVT
EACNLAQKSGDHRLALLLAEAVSNYLPRQMVSKQLEELIELGDDTFYNQTRLKIYSLLAG
QLVLPCNTVTINTCEGMDWKRALALHLWYCCQLEAPIQEAVELYERAFKGSHENQIYSRP
PLPPYIEAEDSGEMEFSVRDTCYHLLCLYCQKCHQLERLLNPTTSTASHLDYRLSWHLSQ
VLQSLSYNHLSAYHRASLHMNFAAHLESLDLWEWAVFVALHIENPISRESAVRNILNRHI
QLSSSELYIEKEELLNERLLVPLEWIHSAKALRANYESKPQEEAWHLLKAGQWNKSHEVI
MRYIAPDAIIHERHDYLYEFLAELSAPVRSATILDWHIAGSVYLEYINISNSMKQLSKAG
EPNLYELDKLLPEVKSLCTKVGSIPCRNSKDRLCQSEMGKKATNFLRLILTFQAEANGEP
QPPMRLLAPYIRNLQMPEDYILHELRALTRSYTMEQAVA
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagccaacaaaccaacagggtttggaacaccatttgcaagcggaactgccact
ccaggatttggatctacatttggtcagtcaacaccatcagctggtggtgggctgttcgga
cagagtgctgcagggaccagtactggtactggactctttgggggaagtggtggatcagca
tttggaactcagtcaacaggatttaactttggagcaacgccaagcagttctggaggattg
tttggacagaagactacggccaatacagggttgtttggcactccagctgcagctagcact
agtaatgcatttggtggatttggaggtgcagcaccagcatttggaggcacaacaacaacc
agcactgcagcgggtggcctatttggaacaacaaataatgcaggaactgggctatttggg
tccagcccagccttctcgcagcagccccaggctggcactaccgtaaaatataatccgccc
cagggtcaggatacaatggtaaagaatggagtgacccagaacataactaccaaacatcaa
tgcatcacagcaatgaaggagtatgaagggaaaagtttagaggagttaagaatggaggat
tatgctgcaggaaggaaagggaaacaagcaggtgcaacatctggcttcggaggttttggt
acccctgctgcagctgccactcaaccaacaggttttgcctttggccaggccaagccaaca
ggttttggagcgtcaactgggtttggaaccaatacatctacagggggaggcagcctgttt
ggtcagcctacagcccaggcatctactggaggaggtctgtttggtcagacaaataaacct
ttgtttggtgccgcaaccaccactacccaaagtgggtttggatttggaactaacaccagt
acaggaactggtggactctttggccaggctcaacagaataagccattgtttggtacaaca
acaactacacaaccaagcttgtttgggacagggactagcacgtttggtcagccggctgca
tcaggggcaggatttgggggatttgggacatctcaagcaggtggactttttgcaaacaaa
cctgcatttggagcacaggctacctccactgctggattcggaggatttgccaactcaaac
tctggagcaaatctatttgccaaaccattttctgcacccactcctggatttggatttaat
acagccactacttcatcgggatttggtgcaacacaaccatttggagctgctaagcctgct
ggttttggtttgacaacaaccgctactccttcatttaactttgctgctggaaacactgcg
ggaaccagtatgtttggtaacacgttgaataaacctggtgcactgggcacgtttggtact
aatactactacaggatttggaggattcaatactgctaatactggtcttggaggggctgca
cctacactgggagggacggtcaactcaacgggagtgaatccggcagtacagattcagcaa
acactgcttgccctatcacagtccccatatggtgactcccctctcttttggaacatgaag
gacagcaagaccaagagagaagaggttttaaagccaactaacccagtggcacagaaagcg
ttactggcaaatcaacataaagtgagtccaagaccaatggcaaagatccgaccaaaagca
ttatctggagctttgaatgggagcaagtcgcagatatttgaaggtttggaagaagatgat
tttagttttggaagtgacacgttccagccaagaaaaagtgttaagaaattgacaatcaag
aaagtgggacaggattctaacactccgagcagagcatcttctgtaagcggggaaccacca
aatgtatcttcattgagagatgaggagcatttcaggggaaggtcatctccagtcgcttac
agtggagagagaagacaagatacagatgttcccgagactgagaatattatccgcagtaaa
ggcatctctgatcagatggcagatactccagatagaagacctaacatggatgacactatt
gctatgctgaatgcccagaataaggccaccagtaacagggaaccagtgagctctggtaca
cgggaaccaggacaagatgatacagtcaacatcagtattatctccagagacgagagtatc
aatgatgacgtgattgacgagagacctatgactcctccccctcctcacccagcgggtatt
gtattatcccgaccagggtattacacaatccctagtacggaggccctggcagagatggtg
gatgaagatgggaattgcttcgtcgaggattttacaatcggtcgagaaggatacggaagt
atcttcttcccaggaactacaaacattgcaaacatgaactttgatgagactgtgtttttc
cgacgtaaggaagtgattgtgtatcctgatgatgataacaagcctgatgttggggatgga
cttaataagaaggcagagatcactttagattgtgtttggccgagggataaatctattgga
acgccaatcaagagccctgagaagttaaagtcaatgagatggcaagaaaaaattgaagag
aactcccttaaagttggagctaaatttatcgattacagacctgaaacagggtcatgggtg
tttgaggtgaaacatttttcaaagtacggtcttgttgatgactcagacgaggaagatatg
ccagaacaggataaaaaacgtctccgccttgcccaggaacaacaaatagccgtacagaaa
caaaaacttcacctggagaaacagaaacagctagatgcttcgaaaacgggggcttcactt
acacatgcaggggctggcagacaggtggcaaagttcacagttggcccagacgaggatagt
gatgggagtggcactatgaggaccgaggttcccatgggggatgatgataatcagatatcg
gaaccttcacaagggggaactagtgagatagtaggagaacttgatgatgaagattttgat
atagcagatgagcaaccatcatctcatcgcttagcaaccagtatgggtgtcgatgctcga
aatatgcaggtgatgaaagcgtcattctttggtgacgaggatgcccctgtccctgcattt
gacggttcaatgttttccaagaagcaaggttctcagattggttcaccattgcttagacag
gtggatagtcccagtctgttcagttctagcctgaaatcgaaatacatgtcaccagtcaaa
attgttaatgtgccgcaaaaggaaataagtaaagaaaagagtttattttctcccagactc
attactccagagccgatcagagctaccaggtcgcctcagaccttccacccacctgtaaag
gagtacatgttactagagagtggcatgacaccacaagattatcagcaaagagttgttggg
gctagggttgaaaaggtcattccaacaataacggagagtttcactcacatgaagcagaaa
cttctcgtagatgctggcatgtttatgggaagatcattccgtgttggttggggaccaggc
tggaccctggctcattgtggagacattgtacaacctaaagattctgaggaggaaaagcct
acaaacacatttagtttatttgccggaggtcagaaacggagcccgacacagggggagaca
cgctggaacgtacatttacagaaaatcaacattgctgatcatatacaatctatcgacaaa
actgtcattcaaaatcaccgtgaaatgttagagatacaattggttcattcaaggagtaca
agggaaggcaactgtcctgtatttactccatctgttggagtagaggccttgcatcaatat
gctgagagaaatcaagatgaactagaaacattaggttcccatccagatgaggctagtgtg
aaacatatgggtatggtgtgggacctttgtgtagcattatggggaaatatgccagagttt
aaagatacagatgttgagagggattcatacctataccacaatgctcgtagagaggcattc
acaagatggctgtcttctgtatcagccgatataatcagagaggaagttcaagaaagtaaa
tataaggaccaaggtcatctacaagccattttgagttgtctgacaggccatcaagtaaca
gaggcatgcaatttggcacagaagtctggcgatcacagactcgcacttctgcttgctgag
gctgtaagcaactacctacctagacagatggtctcaaaacaactggaagagttaattgag
cttggggatgatactttctacaatcagacaaggctgaagatttacagtttattggccgga
caacttgtgttgccttgtaatactgtgacaataaatacatgtgaaggaatggactggaag
agagcattggcattgcatttatggtattgctgccaactagaggcacctatacaagaagct
gtagaactttatgaacgagcattcaaagggtcacatgagaatcagatatattcccgccca
ccgttaccgccgtacatcgaggccgaggactccggcgagatggaattctccgtaagagat
acatgctatcacttgctgtgtctgtactgtcagaaatgtcatcagttagaacgtcttctg
aatcctactacgtctacagcaagccatctagattatagacttagctggcatttaagtcaa
gtgcttcaaagtttatcgtacaatcacctgtcagcgtaccatagagctagtctacatatg
aacttcgcagcacacctggaatctctagacctctgggagtgggcagtgtttgtggcatta
cacattgaaaaccctatcagtcgagaatcagctgtgcgcaacattctaaatcgtcacatt
cagttgtcatcatctgagttatacatagagaaagaggaattattgaatgaacgtttgttg
gtacctcttgaatggatacatagtgctaaggcactgagagcaaactatgaatccaagcct
caagaagaagcctggcatttattaaaggctggacaatggaataaaagtcatgaggttata
atgagatatatagcccctgatgcaattatacatgaacgtcatgactacttgtacgagttc
ctggcagagttatctgcccccgttcgaagtgctacaatattagactggcatattgctgga
agtgtttacctggagtatattaacatctctaatagtatgaagcaactttctaaggctggt
gagccaaacttgtatgaattagacaaactactacctgaagtgaaatcattgtgtactaaa
gtgggaagtattccatgtagaaactccaaggacagattgtgtcagtcagaaatgggaaag
aaagcgacaaactttttacgcctgattctcacatttcaagctgaagccaatggggagccc
cagcctccaatgaggctactagcaccttacattagaaatttacagatgccagaagactac
atcttacatgaacttcgagcattgactagaagctacacaatggaacaggctgttgcatga
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integrated database retrieval system
