Ruditapes philippinarum (Manila clam): 132718239
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Entry
132718239 CDS
T09557
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132718239
04121 Ubiquitin system [BR:
rphi04121
]
132718239
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132718239
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132718239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
DUF659
DBD_Tnp_Hermes
OrsD
hAT-like_RNase-H
Phage_TTP_11
DUF7561
Motif
Other DBs
NCBI-GeneID:
132718239
NCBI-ProteinID:
XP_060557870
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MADENNYDLIKNPKGKSAVWQFFSIKRKRETHEIIENTAFCDRCGVAVKCGGGTTNLRTH
LERHHKMIKLSAQSSVNMSSAVTTSAGSQQPTVMELFNKRQQYKPNSERSRLISSKIANF
MIKDLRPFSVVSNEGFRDLINILDPNYVIPSKTYFSQTLIPELYQSVKSKVVESLSKSHT
VALTTDGWTSRATESYITITSCHINNDWELISHVLQTRAMPCSHTAENVAQVIREAITEW
KLPQNPPLVTDNAANMLAAARLLGSQPHLGCYAHTLNLAVQKGLALNSVSRLLGRIRRVV
SYFHRSTTAAAILRDKIKLLGLRQVKLIQDVCTRWNSAVDMVERFLELQPAIYTALMSKD
IRAKEVDIATLSEVDIGLAENIMSVLIPIRTVSTALCSESMPTASLILPLQKKLIKGLSV
KDDDMQAISQLKTAISQNLQPRYSDLLPYLECTTLLDPRFKTSCFSEEDAFPITNRVISE
AASTQKVLVKQESDTSPISDMETTGAQSEPALPQLKLGNL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaaaataattatgatttgattaaaaatccaaaaggaaagagtgccgtttgg
cagttcttttcaattaaaaggaaaagagagacacatgaaattatcgaaaataccgcgttt
tgtgatcgatgcggtgtagcagtcaaatgtggtgggggtacaacaaatttacgaacgcac
ttggaaaggcatcacaaaatgataaaattatcggctcaaagttctgttaacatgtcatct
gcagttacaacatcagctgggagtcaacaaccaactgttatggaacttttcaataaaagg
caacaatacaaaccaaattctgagagatcgaggttgatttcgtcaaaaatagcaaatttt
atgataaaagatctgaggccttttagcgttgtaagcaatgaagggtttcgtgacctcata
aatatattagatcctaattatgttatcccttcaaagacttatttttcacaaactttgata
ccagaattatatcagagtgtgaaatccaaggtcgtcgagagtttgtcaaaatcacacaca
gtagccttgacaactgacggctggacaagtcgggctacagagtcctacattacaatcaca
tcatgccatataaataatgactgggaactaataagtcatgttcttcagaccagagcaatg
ccatgcagtcatacagcagaaaatgttgcacaggttatcagagaagctataacagagtgg
aaattaccacagaatccaccacttgtaaccgacaatgcagcaaatatgctggctgcagca
cgattacttggcagtcaaccacacctgggttgttatgcacacaccttaaatcttgcagta
cagaagggtcttgctttaaatagtgtgtctcgtttacttggcagaatcaggagggttgtc
tcttacttccatagaagtacaacagcagctgcaatattgcgtgacaagattaagcttttg
ggcttgcgacaagtaaagctaatacaagacgtatgtacccgatggaattcagctgttgac
atggttgaaaggtttcttgaacttcaaccagccatttacacagcccttatgagtaaagat
attcgtgcaaaggaagttgacatagctactttaagtgaggttgatatcggtcttgcggaa
aacataatgtcagtgctgattccaattcgcacagtgtcaacagccctttgctctgaatct
atgccaacagcttctctgatactgcctcttcagaaaaagcttatcaaggggctttcagtc
aaagatgatgatatgcaagccatctcacaactgaaaactgcaatatcacagaaccttcaa
ccaaggtactctgatcttctaccataccttgaatgcacaacactacttgatccaaggttc
aagacatcctgcttctcagaggaagatgcttttccaataacaaacagagtaatctctgag
gctgcttccacacagaaggttctagttaaacaggaatctgacaccagtcctatatctgat
atggagacaacaggggcacagtctgaaccagcattaccacagcttaagctaggtaattta
taa
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