KEGG   Ruditapes philippinarum (Manila clam): 132718464
Entry
132718464         CDS       T09557                                 
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    132718464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rphi03000]
    132718464
   03021 Transcription machinery [BR:rphi03021]
    132718464
Transcription factors [BR:rphi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    132718464
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     132718464
  RNA polymerase III system
    TFIIIB
     132718464
  RNA polymerase I system
    SL1/TIF-1B
     132718464
SSDB
Motif
Pfam: TBP DUF3874
Other DBs
NCBI-GeneID: 132718464
NCBI-ProteinID: XP_060558147
LinkDB
Position
Unknown
AA seq 265 aa
MADGQVIAGGVSQLPGTNGGVIAPEGYDPNPQPEEEDVPMLDININNVVCSFNTKCHLNL
KRIAMEGTNVEYHRQHGMLNMRLRNPYTTASVWSSGKITCTGALSEEFSKIAARKFARKI
QKMGYKVKFTNFRIVNVLGTCSLPFALDITKFSMEHKEASYEPELHPGVTYRIKSPKATL
KIFSTGSITVTAPRVANVQSAIEYIYPLVADFNAGPRSVKTSSSVNNVMNKRLQAERKVV
DDESDFDGSSMEDSDGDFDSDVSQD
NT seq 798 nt   +upstreamnt  +downstreamnt
atggcggacggtcaagtcatagctggtggcgtaagccagcttcctggtacaaatggtgga
gttattgcccctgaaggttatgatcctaaccctcaaccagaggaagaggacgttccaatg
ttagatattaatataaacaatgttgtatgcagctttaataccaagtgtcatctgaatttg
aaaagaattgccatggagggtacaaatgtagaatatcacagacaacatgggatgttaaat
atgagattaagaaatccttacactacagccagtgtgtggtcttctggtaagatcacatgc
acaggggccctgagtgaagagttttccaaaatagctgcaaggaagtttgcaagaaaaata
cagaaaatgggatataaagtaaagttcaccaatttccgtatagtgaacgtccttggaaca
tgttcactgccatttgcccttgatattactaaattttccatggaacacaaggaagccagt
tatgaacctgagctgcatccaggtgttacttacagaataaaaagtcccaaggctacactg
aaaatattctccacgggcagtataactgtcacagccccacgggtagcaaatgtacagtca
gcaatagaatatatatatccattagtggcagactttaatgctggacctagatctgtaaaa
acttcttctagtgtgaacaatgtgatgaacaaaagactacaggctgaacgcaaagtcgtg
gatgatgaatcggattttgacggaagtagtatggaagacagtgatggagattttgacagt
gatgttagtcaggattaa

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