Ruditapes philippinarum (Manila clam): 132718773
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Entry
132718773 CDS
T09557
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132718773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132718773
Enzymes [BR:
rphi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
132718773
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132718773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
132718773
NCBI-ProteinID:
XP_060558486
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MAAPMWKTIPCKIAELRLDLTLACGQSFRWKEYMPGIYTGVIGNGVWQLHQTDTELFYKV
YRNKDDVKAELGDAVDIKQEIKTEPDLDTVVPAKKRKKENSKMHCIKKEPVDNLIPKVKK
DLETMNSHCLKSFPPVHNNSSVEQETDSDDHVLKDYFQLDIKLEEMYKSWSKADQHFSKI
SKEFTGIRMLRQEPVECLFSFICSSNNNISRITSMVDKLAKHYGRKILVSNCVDGEEFYI
FPKVEALAAEGVEENLRKLGFGYRAKYIQQSARYIQENGGEDWLYTMRSMEYKDAKKNLM
KLCGVGAKVADCVALMCLDQPGSIPVDTHVWQIAARDYMPKLKQAKSLNEKLYEEIGDYF
RDLWGPYAGWAHSVLFTADLKQFKNGTKESPKKAVKRKGKDSTKEEKKKSKSK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccatgtggaaaacaattccgtgtaaaattgcagagcttcgtttagatctc
acactagcttgtggacagtctttcagatggaaggaatatatgccaggtatttacacaggg
gttattggcaatggagtgtggcagttacatcagacagatacagaactgttctataaggtt
tatagaaataaagatgatgttaaggcagaattaggagatgctgtggacattaaacaagag
ataaaaacagaaccagacttggatacagttgttcctgcaaagaaaagaaagaaagaaaat
tccaagatgcactgcataaagaaagaacctgtggacaatttaataccaaaagtaaagaag
gatctggaaacaatgaattcacattgtcttaaatcatttccacctgtacataacaattcc
agtgttgaacaagaaactgatagcgatgatcatgttttaaaagattattttcagctagat
attaaattggaagaaatgtataaatcttggtcaaaagccgaccaacatttttcaaagata
tcaaaagaatttactggcattcggatgcttagacaagaacctgtagagtgcctattttca
tttatttgttcgtcgaataacaacatttctagaattacttctatggtagacaagttggca
aagcactatggacgtaagatattagtttccaattgtgtggacggagaagaattttatata
tttccaaaggttgaagcattagctgcagaaggagtggaagaaaacttacgaaagttgggc
tttggatatagggcaaaatacatacagcaatcggctagatatattcaagaaaatggtgga
gaagattggctgtatacaatgcgtagcatggaatataaagatgctaagaaaaacctcatg
aagttgtgtggagttggtgccaaggtagcagattgtgtagctctgatgtgtttagaccag
ccaggttcaatccccgttgacacccatgtatggcagattgccgccagggactacatgcct
aaattgaagcaggcgaagtcactaaatgagaagctgtatgaagagataggagattacttt
agagatttgtggggcccttatgcaggctgggcacatagtgtactatttactgctgatctg
aaacagtttaaaaatggaacaaaagagtccccaaaaaaggctgtgaagagaaaaggcaag
gacagtactaaagaggaaaaaaagaaatctaaatcaaagtga
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