Ruditapes philippinarum (Manila clam): 132718789
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Entry
132718789 CDS
T09557
Name
(RefSeq) vacuolar protein sorting-associated protein 33A-like isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04140
Autophagy - animal
rphi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132718789
04148 Efferocytosis
132718789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132718789
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132718789
Hops complex
132718789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
132718789
NCBI-ProteinID:
XP_060558500
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MAASGASHLGNGKINLGALRDYYRRELLECLDKCIGTKALVWDDALTGPFGLIAEYSLLK
EHDVEKMMLLPKENQALPTSTVQNIIFVTRPKLELMDQIAQSLLREDQKGGFRREFHIIF
VPRKSLLCEKKLKEAGVHGSFTNIEEFSLALIPFDYDLMSMEMDNSFKECYLENDNTSMF
YAAQSLVTLQTLYGIIPNIDGKGECAKHVVDMMLRMRRELEGHEPQITPQIDNLVIIDRT
VDLLTPLLTQLTYEGLIDEFYGINNTSVKLPPEKFRSKDESGSTSDMEYKSVVLNSTDEL
FSELRDKNFSAVGNTVSKKAKIITQQFDERHSAKTVGEMKNFVTKLPHLQQARASLATHT
SIAELIKDGTDTDEFMECLRCQQELYKGEETDKVNQYIDDCIGRREPLLKVLRLLCIQSF
CNNGLKPKVFEYYKREIVQTYGLQHLVTLTNLERVGMLRLHTNRSYQTVRKSLKLTVEDV
NEMAPNDISYVYSGYAPLSVRLIQYLARPGWRSITEVLSILPGPRVDEVQQIPVALRKRR
SSITSSHSSMADQKVTLVFFLGGVTYAEVAALRFLAQQDDDKAEKEGTGGTDYVIATTKI
INGSSLLDKLTYNVEPVKLNPFM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttccggtgcttcccatttaggaaatggaaaaataaatttaggagccctgcgt
gattactacaggagagaattgttagaatgtttagataaatgcattggaactaaagctctt
gtatgggatgatgctctaactggaccttttggactgattgcagagtactctcttctaaaa
gaacatgatgttgaaaaaatgatgttgttacccaaggagaaccaggctctgccaaccagt
actgtacaaaatattatctttgttaccagacctaaattagaactaatggaccagattgca
caaagtcttttaagagaagaccagaaaggtggttttagaagagagtttcacatcatattt
gttcctagaaaaagtcttttgtgtgaaaaaaagctgaaggaagccggagttcatggttcg
tttaccaatatagaagaattcagcctcgctctcattccttttgattatgacctaatgtca
atggagatggacaattctttcaaggaatgttatttagagaatgacaacacaagtatgttc
tacgcagcccaatcattggtcactttacaaactttatatggtatcataccaaatattgat
ggcaagggagaatgtgctaagcatgttgttgacatgatgcttcgtatgagacgtgaatta
gaaggtcacgaaccacagattactccgcaaatagacaacctcgtgataattgataggacc
gtcgatctattaacacctcttcttactcaacttacatatgagggattgattgatgaattc
tatggcatcaacaatacctcagtaaaactaccaccagagaaatttagaagtaaggacgaa
agtgggagcacttcagacatggagtacaaatccgtcgtcttaaattccacggatgaactg
ttctctgagctgcgtgacaaaaatttcagtgcagttggtaacactgtcagcaaaaaggca
aaaattatcacacaacagtttgatgagagacattccgctaaaacagttggtgaaatgaag
aattttgtgaccaagctgcctcatttacagcaagcaagagcatcattagcaacacataca
tcaatagcagagttaattaaggatggtacagacacagatgagtttatggaatgtttacga
tgtcaacaagaattatataaaggagaggagacagataaagttaaccagtatatagatgac
tgtataggtagacgagaaccgttattgaaggttctgagattattgtgtatccagtctttc
tgtaataatggattaaagccaaaagtttttgaatattataaacgagaaattgtacagacg
tatggtttacaacatctagtgacactgaccaatttagagagagtcgggatgctacggtta
catactaacagaagctaccagactgtcagaaagtcccttaaactcactgtagaggatgtc
aatgaaatggcccccaatgatatatcgtatgtatacagtggttatgccccgttaagtgtg
cgactgatacagtatctggcccgaccaggctggagaagtatcactgaggtactgagtata
ttaccgggaccaagggttgatgaggtccaacaaattcctgtagctcttagaaaaagaaga
agttctataacatcgtcacattccagtatggctgatcagaaagtcactctagtcttcttc
ctgggtggggtaacatacgcggaagttgcggcccttagatttctagcacaacaagacgat
gacaaagcagaaaaagaaggaactggtgggaccgactatgtgatagctacaaccaaaata
atcaatggcagttcattacttgataaacttacatataatgttgaacctgtgaaactgaat
cctttcatgtga
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