Ruditapes philippinarum (Manila clam): 132718794
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Entry
132718794 CDS
T09557
Name
(RefSeq) protein pelota-like
KO
K06965
protein pelota
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132718794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132718794
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132718794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
EpmC
Motif
Other DBs
NCBI-GeneID:
132718794
NCBI-ProteinID:
XP_060558509
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MKLVSRDIDKNGQGCVTLVPEEAEDMWHAYNLVCVDDTLRSTTIRKVQNESATGSVSVNK
VRTTLTIRIEAIDFDTQGCVLRVRGRNIEENQYVKMGAYHTLDLEMNRKFTLGKHEWDSI
ALDRIELACDPTQHADLAAIVMQEGLAHVCLITPNMTLVRAKLETNIPRKRKGSCSQHDK
GLTRFYDQILQAIIRHVNFDIVKCVLVASPGFVKDQFMEYMFQQALKLDYKVLLDNKSKF
VMCHSSSGFKHSLKEVLQDPTITSKLTDTKATSEVKALDDFYQMLQNDPSRAFYGIKPVE
KAAEQQGVEVLLISDELFRSMDLKARKRYVRLVDTVREAGGDVKIFSSLHVSGEQLGQLS
GVAAILRFPMDDEDSDEED
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttagtagagatattgataaaaacggacagggatgtgtgaccctggtcccg
gaagaggcagaagatatgtggcatgcctataaccttgtgtgtgttgatgacacattgaga
tcaaccaccattaggaaggtacaaaatgaatctgccacgggaagtgttagtgttaataaa
gttaggacaacacttacaatcaggatagaagcaatagattttgatacacaaggatgtgtt
cttagagtaagaggtagaaatattgaagagaatcaatatgtgaagatgggagcttatcac
acactggatcttgaaatgaacagaaaatttacacttggcaaacatgaatgggatagtatt
gcattagatagaatagaattagcgtgtgacccgacacaacatgcagatttggctgctata
gtgatgcaggagggcttggctcatgtatgtttgattacacctaacatgaccctagtccga
gccaaattagaaactaatatacccagaaaaaggaaaggtagttgctcacaacatgacaaa
ggcctcacaagattttatgaccaaatattacaggccattataagacatgttaattttgat
attgtgaagtgtgttttagttgctagtcctgggtttgtaaaagaccagtttatggaatat
atgtttcaacaagcattaaagttagactataaagtgttattagacaataagtcaaagttt
gtcatgtgtcattcctcatctggatttaaacactctctaaaagaggtgttacaagatccg
acgataacttctaaactaacagataccaaagctacaagtgaagtcaaagcattagatgac
ttttatcaaatgttgcaaaatgatccgtctcgtgcattttatgggataaagccagtggag
aaagctgcagagcaacagggtgttgaagtattgctcatctctgatgaattatttagatcg
atggatttgaaggcacgtaaacgttacgtaagacttgtagatacagttagagaagctggg
ggtgatgtgaagatattctctagtttacatgtatctggggaacaattaggtcaattatct
ggtgtagcagccattttaagatttccaatggatgatgaggattcagatgaggaagattaa
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