Ruditapes philippinarum (Manila clam): 132718838
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Entry
132718838 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132718838
04082 Neuroactive ligand signaling
132718838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132718838
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132718838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132718838
NCBI-ProteinID:
XP_060558561
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MNEMSVTNSSTAKYVESSTFSIANSSSTTPSKSNGNYLPTTSTLNKVTCDEASLQRHLFK
DYNINVRPVTNFYSQVNVTLGLTLRKIQHVDEINQAFTTIVNLLLYWTDQILTWDKAHCH
GISSIEFPFHDNIWIPDLMIYNALKEPGKLGIKDAFVRLYDNGQIFVWTQISVETACEIK
TKKYPFDVQICDIAFGKFISPDDKVYIQPLSENIDLSEYVNIAEWEIIHNQATIKLIPFN
ISSDILAGESAIDTLNYTAIIYTVQIRRSCHLCLHNAIIPVLILAILNLLTFFVPCESGE
KTSYPISIFLTLAVFLTIITQSLPESVDGVSYLSSYVTFQLSCSAITLCCAIISLHLHYR
KRNVMMPKWIHLLMCKFNCRRNLFAKEDKTTAAETWNLEHDQQEQEDKILESQNEEYDLD
VSFIFDKTMFTLLTICEIVATIFFIYIIFN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgtcagttactaattcgtctactgcaaaatatgtggaatcgtcaacattc
agcatagcgaactcgtcaagtacaacaccttcaaaatcaaatggaaattatttgccaacg
acatcaacattaaataaagttacttgtgatgaagcatccttgcaaagacatttattcaag
gattataacatcaacgtgaggccagtaactaatttctatagtcaagttaatgtcacgttg
ggacttacattacgtaaaattcagcatgttgatgaaattaaccaagcatttacgacaatt
gtaaatctacttctttactggacggatcaaattcttacttgggataaagcacactgtcat
ggaatatcgagcattgaatttccatttcacgataacatttggatacctgatttaatgata
tacaacgctttaaaggaaccgggtaaacttggcataaaagacgcctttgttagattatat
gacaatggacaaatttttgtgtggacacaaattagcgttgaaactgcatgtgaaattaag
acaaagaaatatcctttcgatgtacaaatatgtgatatagcctttggaaaattcatcagt
cctgacgataaggtatatatacaaccattgtcagagaacattgatttatcagaatatgtt
aacatcgctgaatgggagataatacacaatcaagcaaccataaaattaattccatttaac
atatcttctgatattcttgcaggcgagtcagcaatcgacacccttaactatacggcgata
atatatactgtacaaatccgacggtcctgtcacttgtgtctccataatgcgatcatccca
gttctgattctggcaatattgaacctgctgacctttttcgttccttgcgaaagtggcgag
aaaaccagttacccaatttctatttttctaaccttggcagttttcctgacaattattaca
caatctttgccagaatcggttgatggcgtgtcataccttagttcctatgtaacatttcaa
ctctcatgtagtgcgataactctttgttgtgcaattatttcgttgcatctccattacaga
aaaagaaatgtaatgatgcccaaatggattcatctgttaatgtgtaaattcaattgtcgc
agaaatttgtttgcaaaggaagacaaaacgacggcagcagaaacatggaatttagaacat
gaccagcaagaacaagaagacaaaatattagaatctcaaaacgaagaatatgatttagat
gtatcgtttatatttgacaagacaatgtttacattactaacaatttgtgaaatagttgcc
acgatattttttatctatatcatatttaactga
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