Ruditapes philippinarum (Manila clam): 132718990
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Entry
132718990 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132718990
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132718990
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132718990
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
132718990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
TAN
Motif
Other DBs
NCBI-GeneID:
132718990
NCBI-ProteinID:
XP_060558705
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MENLPVEIKFAQNLAGNETKTRNKAVKKLKKYLRAKSASKKDGFSEEDFLKLWKGLHYCM
WMQDKPLLQEELSTTLTHLVHDLSTVEAQLLFIKVFFVTEAREWHSIDIWRLDKFMMTVR
NMLNQSLVLVKKLKWDKNRLDGLTQVFYDTIMNPDAENIPDGLKIHFCDIYLEEVEKVGD
GQLTGSQLLQLLVPFIKFMQKAKNGTLIKRMISCVFDPVITRLADEIKLKQSQNMDTDAS
EMEDIPYRTLKFDGKLISEYIFRVSQEDCVLLRNRPTMYGLVKKLQDVEQGVLPEKKEIV
VTEGVTGHDVRAAVNTLMNLETKKDGKKKFKKKKNKKENHNDVGVNENADPNNNSAGENN
GPENQMPSTSNAGRKRKHSQTMDGEPFTKMKKGKIEQESKLEDNVNEKKTFQKLKNKFSK
LEVMKGKKEKKLQIENKSKEVAQSKNEKSNSVTKPVSEKTGKDVEKNLDKNKKEHNAVTK
DTPKVVTVSAEVPASFKKQADKKSPDTLKKKGKRTHSQLANDDTNSTNNKISTPVAQNLS
TVPSITVQEPTPIVKSGTPATKSPAVSNGLQDGEVEIWIPNKKYKGNKDTNITPKTNFAS
FDQSRPPVAFVKRSLSKSLKKTPSSQKTPTASGVTGSAKRVSFDMKKNKAQGFKESLNSP
LTPYNPAKQPDTGILKSPGSALASKGPKKDIAKNSNSTPETPVTRQASNKVVAQRKSTST
PVVTIGFEKKKATPNRRKKAADFFL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttacctgtagagataaaatttgcccaaaacctcgctggaaatgaaacaaaa
actcgaaacaaagctgtgaaaaaattgaaaaagtatttgcgtgcaaaatctgcatcgaaa
aaagatggcttcagtgaggaagatttcctcaagctatggaagggtttacactattgtatg
tggatgcaggacaaacctcttttacaggaagagttaagtaccacattgacacatttggta
catgatttgtcaactgttgaggcccagctgttgtttatcaaggtgttctttgtaacagag
gcaagggaatggcacagtattgatatatggaggctggataagttcatgatgacggttagg
aatatgctgaaccagtcactggtgctcgtgaaaaaattaaagtgggacaaaaacagactg
gatggactgacacaggttttttatgacactataatgaatcctgacgcagaaaacataccg
gatggtctaaagatacatttctgtgacatttacctggaggaggtggagaaagttggcgat
ggtcagttgactggttcccagttactacagttattggttcccttcatcaagtttatgcag
aaagcgaaaaatggaacattaataaagagaatgatatcctgtgtatttgatccagtcatc
acaagacttgctgatgaaataaagttaaaacagagtcagaacatggacactgatgccagt
gaaatggaggatataccttaccgtactttaaagtttgatgggaagttaatatctgaatac
atattccgtgtgagccaagaagattgtgtactattgaggaatagacctacaatgtatgga
ctagttaaaaagttacaagatgtggagcaaggagtgttaccggagaagaaagagattgtt
gttactgaaggtgttacaggtcacgatgtgagagcagccgtaaatacgttgatgaatttg
gagacaaagaaagatgggaaaaagaagttcaaaaagaaaaagaacaagaaagaaaaccac
aatgatgtgggtgtgaatgaaaacgctgatccaaataacaacagtgctggtgagaataat
ggtccagaaaaccagatgccctcgacatccaatgcagggaggaaacgtaaacattcccaa
acaatggatggggaaccatttactaaaatgaagaaaggaaaaattgagcaagaaagtaaa
ttagaggataatgttaatgaaaagaaaacatttcaaaagttgaagaataaattttcaaag
ttagaagttatgaaagggaagaaagagaagaagcttcaaatagagaataagtctaaggaa
gtggcacagtctaagaatgaaaaatcgaacagtgttacaaaacctgtgtcggagaaaact
ggtaaggatgtggaaaaaaatttagacaaaaataaaaaggaacataacgctgttactaag
gatacgcctaaagttgtgactgttagtgctgaggtgccagcgtcttttaagaaacaggca
gacaagaaatctccagacactctgaaaaagaaaggtaaaagaacgcattcacagttggct
aatgatgacaccaactcgacaaataataaaatttcaacaccggtagctcagaatttgagc
acagtaccttcaattactgtacaagaacctacgccaattgtgaaatctgggacccctgca
acaaagtctcctgccgttagtaatggtctccaagatggtgaagtggagatttggattcct
aataaaaaatacaaaggaaataaagatacaaacattactccaaagacgaactttgcatca
tttgatcagtctagacctcctgtagcatttgttaagaggtctttaagtaaatctttaaaa
aagacgccaagttcccagaaaaccccaacagcaagtggtgtgacagggtctgctaaacgt
gtcagttttgatatgaagaaaaacaaagcccaaggttttaaggagagtttaaacagtcca
ttgacgccttataatccagccaagcaaccagatactggaatcctcaaatcaccgggttct
gccctggctagtaaagggccgaaaaaagatatagctaaaaatagtaacagtactcctgaa
accccggtgacaagacaagcttctaataaagttgtggctcagagaaagagcacaagcaca
cctgtggtaaccattggttttgagaaaaagaaagccacgcccaatcgtaggaaaaaagca
gctgactttttcttgtga
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