Ruditapes philippinarum (Manila clam): 132719196
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Entry
132719196 CDS
T09557
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132719196
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
132719196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
Ig_TRAPPC10
SNAP
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
132719196
NCBI-ProteinID:
XP_060558932
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MTPDYHVLSQMSNLSLEIPFHGSTFYNLAIWPFTQSYGRPARNVQLDASFVPYDDDILPD
DSVKTLVSRLYFHIFWTDCVVVLDPLNGDSKSMLQWNQFLSRLRTLLLQAFTRHLQKYED
NMRALREERNKVGWNFQEYFIVQEELAFMKFGMMLGKLFVPNNDLLTIEYILTILGLRDI
EVDYRTNKTVTSDLHRLVLQQLTTKKSIQLESVPWLASLTEPCTVWAGLSLYKPITWDKR
DLIKDNKVTLLEFRNYLFSRQCAILLLLNRPGEIIQRGIDYLHETVQEMKTLDIEIKEGG
MDCWVYLSGLEILQKCEKMTDTINPRAQALNTAYLWDYVCRKLNKLGELCGLMPGDSNSP
SSDQLSLVVDLTSGMGLEIQSDDDDEESTKSSPRDKLREALSSRESFQRIYLEQSELAMG
TFKYIGRFRSARMIGKNLADFYMKLGEPQKAENFLMDAMTSYHQEGWEKLRDEARLELAQ
CQYQVADHYKYVKTACQVASSTSLQMEDRTFHMAEVLKIANSTGTQIVLKASPLLKIEIT
DISTSKVTVEEPFNITMEIDNTGPCDISCDSIWLTLTDCASDLIMGTDKRLETLKTPVTR
QTSNSSLDNRHVMNLKRMKKQAPSAIDLCLHYEGSPSEPVTTGIACVNSHEVLKRNDSSG
GMLKKVDEKVTKDTYNQSVCLKNVILKPGKNMVEIICEGVTSGNYKPGQAGFKVKQLELI
KDMDSDLSVMVTCDETFCEIFPETLMAGTIQEVTVCLHAGNVPIDPGSRVKVMPSDDLSI
ETCYPNNTVIQEEEVARGNTTEWKMKILQEPDVTGGKTIENKIAFDCSWLPRPLLTTLTL
QNPFNLTHKLHTAREMKYIQVMVHGQCETQFVLKDWSLAADTCKDVDLVGMNKPGSQLKV
NIDQSSSFMWQLKSNIAQLPPLDLTFTSHYCCITQDGEELRQFQYQFSLPEFHTLYTVKA
EVTPNGENKVCKTGTLSTLKIHVLEMPVSKPLSDHDLMYEVIGQSNWNMHGISTGVFTVT
GGSYNTSLQVMPLVSGFIPLPKIKLYKYNGAKTTDVWEKDNSSKDEVLDSTDDESSDSDQ
VTDRIDFNKGQVYYSSLGKQVHVYPEEVRGEVEVTIV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgactaccatgttttgagccaaatgtcaaacttaagtctcgaaataccattc
catggctctacattctacaacttagctatctggccttttactcagtcatatggaagacca
gctcgtaatgtacaattagatgcaagctttgtaccatatgatgatgatatattacctgat
gattctgtgaaaactttagtcagccgactctacttccatatattttggacagactgtgta
gtggttcttgatccattaaatggagattcaaaaagtatgttacagtggaaccagttcttg
tctcgcctccgtacattacttctacaagcttttactagacacttacagaagtatgaagat
aacatgagggcactgagagaggagagaaataaagttggttggaatttccaggaatatttc
attgttcaggaagagttagcattcatgaagtttgggatgatgttagggaaactatttgtc
ccaaataatgacctactaactatagaatatattctaactattctaggtttacgagatata
gaagttgattatagaactaacaagactgtaacgtcagaccttcatcggcttgtcttgcag
caactaactactaagaaatctatacagcttgagtctgtaccctggttggcaagccttaca
gagccgtgtacagtatgggcggggctttctctgtataaaccaatcacctgggacaagcgt
gacctgattaaggataataaagtgacgttacttgaattcagaaactatcttttctcgaga
cagtgtgcgatcctcctactccttaatcgtccaggggagataattcagcggggcattgac
tatctacatgaaactgtacaagaaatgaagactttagatatagaaataaaggaaggtggc
atggattgctgggtatacctgagtggtttagagatcttacagaaatgtgagaaaatgact
gacacaattaaccccagagcccaggctttgaacactgcatacctctgggattatgtctgt
agaaagttgaacaagctaggagagttatgtggactaatgcctggagatagtaattccccg
agctctgaccagctgtctcttgttgttgatcttacctcgggtatgggcctggaaatacag
tcagacgatgatgatgaagaaagtacaaagagttctcctagggataagctaagggaggca
ttatcatccagagaatccttccagaggatttacttggagcaatctgagctggctatggga
acatttaaatacattggtagattcaggtcggcacgaatgattggtaaaaatctggctgat
ttctatatgaagttaggagagccccagaaagcagagaactttctaatggatgctatgacg
agctatcatcaggaaggctgggagaagttacgagatgaagcgaggctagaactggcacag
tgccaatatcaggttgcggatcattacaagtatgtgaaaacagcatgtcaggtggccagt
agcacatcactacaaatggaagataggacattccatatggctgaagtgcttaaaatagct
aattcaacaggaactcagatagttttaaaggcatccccgcttcttaaaatagaaataaca
gacatcagcacatctaaagttactgttgaggaacctttcaatatcaccatggagattgac
aacactggaccatgtgacatatcatgtgattcaatatggctgactttgacagactgtgcc
tctgatttaatcatgggtactgataaaagacttgaaactttgaaaacacctgtaaccaga
caaacaagtaattccagtctagataacagacatgtgatgaacctaaaacgtatgaagaaa
caagctccatctgctattgatttatgtttgcactatgaaggaagtccaagtgaaccggtt
acaaccggtatagcatgcgttaactcgcatgaagtgctcaaacgaaatgacagttctggt
ggtatgcttaaaaaggtggatgaaaaagtgacaaaagatacttataatcaaagtgtatgt
ttgaagaatgtgatacttaagcctggtaaaaatatggtggaaataatctgcgagggtgtt
acatctggtaattacaaaccaggtcaggcaggtttcaaggtcaaacaattagagttaatc
aaggacatggactctgacctttctgttatggtaacctgtgatgaaactttttgtgaaata
tttccagaaaccctaatggcaggtactattcaggaagtgacagtttgtttacatgctgga
aatgtaccaattgaccctggaagcagggttaaggtcatgccctcagatgacctttccata
gaaacatgctaccctaacaacactgtgatacaggaagaggaggttgctaggggcaacaca
actgaatggaaaatgaagattttacaagaaccagatgtcaccggtggcaaaacgattgaa
aataaaatagcatttgactgttcctggttacccagacctcttttgacaactttaacatta
cagaacccttttaatttaacacataaactgcatacagcaagggaaatgaaatatatacag
gtgatggtacatggacaatgtgagacacagtttgtgttgaaggattggtccctggctgca
gatacttgtaaagatgttgatcttgttggcatgaacaaacctggatcccagctcaaggtg
aatattgatcagagcagctcatttatgtggcagttgaaatcaaacattgcacagttacct
cccttggacctaacattcacttctcattattgttgtataacacaagatggtgaagaacta
cgacaattccagtaccagttctccttgccggaatttcatacattgtatactgtcaaggca
gaagtgactccaaatggggagaacaaagtttgtaagactggtaccctgtcaacattaaaa
atccatgtccttgaaatgcctgtgagcaagcctttgtcagatcatgatttgatgtacgag
gtcataggtcagtcgaactggaatatgcatggaatatctacaggtgtgtttactgttact
ggaggtagctacaatactagcttacaagtgatgccacttgtttctgggttcattccatta
ccaaagattaaactatacaagtataatggtgctaaaaccaccgatgtatgggagaaggac
aattcgagtaaagacgaggttttagacagtacagatgatgagagttcagacagtgatcag
gtcaccgaccgtatagacttcaataaaggtcaggtgtactatagcagtctgggaaaacaa
gtacatgtgtacccggaagaggtcagaggcgaggtggaagttacaattgtgtga
DBGET
integrated database retrieval system
