Ruditapes philippinarum (Manila clam): 132719328
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Entry
132719328 CDS
T09557
Name
(RefSeq) glycine receptor subunit alpha-3-like
KO
K05195
glycine receptor alpha-3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132719328
04082 Neuroactive ligand signaling
132719328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132719328
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Glycine
132719328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132719328
NCBI-ProteinID:
XP_060559079
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MPLGSKSFKMKIVIAAIYLATINTKYFARSHAEFRRNALFSEQFEDVDNVENKSERQRTL
DNLLNNYDPRIPPNYEEDFPVTVLVQLHITSIDSISESNMDYSIGMFLRQTWNDSRLAYK
KIPRLRSLELDSRLIQSIWVPDLFITNEKKAQFHIVTVPNKLMHIYPEGRVQYSIRISAT
LHCNMDLRKYPLDSQVCAVIMESYGYSTDTLEFRWNPQPVSRDTRLALAQFDLGEMKRSQ
CDKEYITVTYTCIMLELDLTRKFGYYITQIYIPSMLIVILSWVSFWLDKEAVPARISLGL
LTVLTMTTQSAGARSSLPKVSYVKGIDVWMAACLLFVFAALIEFAFVNVYFRVEKRRKQT
NIPAGNEKLHNVQNPDNEKGEIKEKEHSRFQMFLPDKEVAHTIDRLSRLIFPSVFIIFNI
IYWCIYTLWTPI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggggtccaaatcattcaagatgaaaattgttattgcagcaatttatctagca
acaataaacacaaagtactttgcacggtcacatgccgagtttcgacgcaatgctttgttt
tccgaacaattcgaagatgtggacaatgttgaaaataaatcggaaagacaacgaacattg
gataatcttcttaacaactatgatccccgaattccaccaaactacgaggaagattttcca
gtgacagttctggtacagcttcatattacaagtattgatagtatcagtgaatcaaacatg
gactattcaattggaatgtttcttcgacaaacgtggaacgattccagactggcctacaag
aaaattccgagattgagatctttagagcttgattcccggctgatacaaagtatatgggta
ccagacttatttataaccaatgagaagaaagctcagttccatatagtaactgttccaaat
aaactgatgcacatctatccagagggacgagtccaatatagtatcagaatatctgcaact
ttacattgtaacatggacctaaggaagtatcctctagactcacaagtctgcgcagtgatc
atggaaagctatggatacagtacagacactttagagtttcgatggaatccacaacccgtc
tcgcgagatacgagacttgcgcttgcgcagttcgacctcggggaaatgaaaaggtcacag
tgtgataaagaatatataacagtgacatacacgtgtattatgctagaactggatttaacc
agaaagttcggttactacataacacagatttatatacccagcatgttgatagtgatactg
tcatgggtatcgttctggttagacaaagaagccgttcctgcacggatttctcttgggttg
cttacggtcctcaccatgacgacacagagtgctggcgcgcgttcgtcacttcctaaagta
tcttatgtcaaaggcatagacgtatggatggctgcctgtttactgtttgtttttgccgcc
ttgattgaatttgcatttgtgaatgtgtactttcgagtggaaaaacggagaaaacaaacg
aatatacctgctggcaatgaaaaattacacaacgtgcaaaatccagataatgaaaaagga
gagataaaagaaaaagaacattcaagatttcaaatgtttctaccagataaagaagttgca
catacaattgatcgtttatcaagacttattttccccagtgtttttatcatctttaatata
atatactggtgtatttatacattatggactccaatataa
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