Ruditapes philippinarum (Manila clam): 132719428
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Entry
132719428 CDS
T09557
Name
(RefSeq) ATP-binding cassette sub-family A member 2-like
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi02010
ABC transporters
rphi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132719428
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132719428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132719428
Transporters [BR:
rphi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132719428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
AAA_23
AAA_15
MukB
P4Ha_N
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
132719428
NCBI-ProteinID:
XP_060559174
LinkDB
All DBs
Position
Unknown
AA seq
2106 aa
AA seq
DB search
MMEKVDRNKPTFFLQLRLLLWKNCITKRRHPIIFLLEVFIPLTLFIVILCIRRTQVAYPI
NEEHYSPKPLPSAGIIPVLQAFCGDDANVFEKNNTRLYTYFEKFHEVLQKNGDTLQSLPT
DFIDQLLGKLVPDSGVLNVSQILLLSKEFPFNLLIDSITSYVSSIHDLPSSDVDKLCSTD
DTTSSQSLPETSKKKKMKHFNSIWQNIEPLLCGKNNAVVTDNINNNTRQNNSEVPPHQDM
ESFEKKIEILTHILYNNPKILFAPNNTLANKIIQKVNSSMAMYSNITYYAEQWQKMSGNI
SKQIYILKSGDIAGMDKEEISTLSQVFSFLDNIACAWLNLVKDVDMNFFTGFSSEDELEY
YFLNRQFQDNVTVVAGLVFENFNDHVYTLPSHVRYKIRQNATLNPETNKIRPPFWYPSPG
SNNLLYYDFGFVWIQDLVERAIIEIQVGKPVTRPGTFLHRMPYPCWLWDAFIWLIQHIIP
LCLMLSWVYSVAMLVQKIVYEKEKRLKEVMKMMGLSDSVHWWAWFITAAVQMTVTVVTLT
LMLYYGRVLSHSNPVIVFMFLEMFALSSIAFSFLISSMFSRAKLAAACAGIFYFITYVPY
MYIAIREDLTGTRIPAYIKTIAAIFPTSALGLGGKYFLFYELEGSGVQWENLHVSPREYD
NFSLQIVLIMIAVDTVFYFILAWYIENVNPGSYGIPKPWYFPFTSTYWCGTSLWETCSFK
RLFGIHRSRRRYNLVNDDPENDDVTVDDDSGIYWCGCNTDCICTFEPDPRDLTRGVVVNN
LRKVYRKGDKPALDSLSMKLYENEITAFLGHNGAGKTTTMSILTGMFPPTSGTATIYGHN
VMSDMDTIRQDLGMCPQYNVLFESLSVEEHLWFYSRLKGVPARDIQENIPRMLSDLSLEN
KGDSRPDALSGGMQRKLSIAIAFVGGSRTVILDEPTAGVDPYSRRAIWNLLNKYKTGRTI
MVSTHHMDEAETLGDRILIIADGKLKCAGTPSYLKSKLGDGYRLCILKDEDMHTNESTEL
NRDKDAQILTMVKQIVPAAFISKHVDNEVHITIPVQTDERHLFVPLFRLLENKKCELGIA
SYGISDSGLEQVFVKITKSCEDGKIAGTVYTEADVTSNLSFDDPGVDSSDRDYVQLRSVE
DIADNMNFQSWDVQMDEGQCKWLNHFKTVLLKRFFYTLRNRKALLSQIILPAVFVSISMT
IALTAPKNSDPEPLVMSTAQYHDLTKPRGNFIPFSIHTLNKTSKHLNSLYVTKFSEKLAD
TFFMPSGIGASCVLKSNLSGALCDGNNLTNGCYDDGCDDIFTSNSVQRNGWTSSSVQLPE
NVQFYPSCHCKSDNVGFTCNERNTVVPPEWRLVTGDILQNITSGVNDEENYLLNTNDKYR
RHRYGGFTFGTTLPYVPDTSAGSHDFTWLYDMLATKVINKVWFNQRGHHSIPVYVNSMNN
ALLRANLHSNSQHPDQYGITLTNHPMKKTNNLLNSDYIQGGTDVLMAIFIIVAMSFVPAS
FVVFLVHERAIKAKHLQFSSGLHPAVYWLSNYLWDMCNYMIPAVCILGILLLFHIESYVG
HGNIEAVIALFLLYGWSITPMMYPASFLFSEPSVAYICLIVLNLFTGITCVVSSVMLKQF
AFDKSLAHVNDVLSNIFLVFPNYCLGNGMMNIAINQYKNEYYSHIGETSKIQAALSWDVT
GKKLVVMAIVGAISFIFTILCEYRFCIKNRIKENISNGEDVSIDCDVAQERENTLIGQYS
DTLLSVEKLSKVYRTRKLGKIQAVKELSFSIPKGECFGLLGVNGAGKTTTFRMLTGDLTP
TSGDAKLLSHSVVKGGRGIQQCVGYCPQFDAVFSELTPREHLQLYARLRGIPVRHHKKVV
ERCLKLLGLTQYRTKSAGTLSGGNKRKLSTAIALIGNPSLILMDEPTSGMDPYSRRFLWD
VIQRLVQAGTSVVFSSHSMEECETLCSRLSIMAKGQLKCLGSVQHLKDKYANGYTVTVVL
ESEQAGQSVEDYILSNMSGSKLRYKGHRNLVFDLKITCSDLADVYKVLKDIPAYLSVADY
TVNQNSLDNVFINFAMEENESIMKDTADDSEPLQDSGCIHDDLDDESLIELQPRLHVSSG
DNLLHV
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaagttgacagaaacaagccgacgttctttttacaacttcgtcttctgcta
tggaaaaattgtataaccaaaagaagacatccgataatatttcttctcgaagttttcata
cccctaacactgtttattgtaattctgtgtatccgccgcacacaggtagcttacccaatc
aacgaagaacattactcaccgaaaccacttccctctgcggggattatacctgttctacag
gcattctgtggcgatgacgcgaatgtattcgagaaaaacaacaccagattgtatacgtat
tttgagaaatttcatgaagtgttacaaaagaatggtgatactttgcaaagtttaccaact
gactttatagatcagttattggggaaacttgttcctgacagtggtgtccttaatgtttca
cagattcttcttttatcaaaagaatttccctttaacttgttaattgacagtataacaagt
tatgtttcaagcatacatgatttgccaagttctgatgttgacaagttgtgtagcacagat
gatacaacttcctcacaatctctgccagaaacatcaaaaaagaagaagatgaaacatttc
aattcaatatggcagaatattgaacctctattatgcggaaaaaataacgctgtcgtcaca
gacaacataaacaacaacactcgtcaaaataacagtgaagtccctccacatcaggatatg
gagagttttgagaagaagatagaaatattgacgcatatcttgtacaacaatcccaaaatc
ctctttgctccaaataatacacttgccaacaaaattatacaaaaggtgaattcaagcatg
gcaatgtacagtaatataacatactatgctgaacagtggcagaagatgtctggaaatatt
agtaaacagatttatatcttaaagagtggagacattgctggaatggataaggaggaaatt
tcgacattgagtcaagtgttctcatttctggacaacattgcctgcgcttggctaaacctg
gtgaaagatgtagatatgaacttcttcactggcttcagttctgaggatgaactagaatat
tatttcttaaacagacagttccaggataatgtcaccgttgtggcagggctggttttcgag
aactttaatgatcacgtgtacacactgccgtcacatgtccgctataagatcagacaaaac
gcaacattaaatccggaaaccaacaaaattagaccaccattctggtacccgagccccggt
tcaaataatttactctactatgactttggttttgtgtggatacaggacctggtagagaga
gcaattattgagatacaggttgggaagccggtaaccagaccaggaactttcctacacaga
atgccatatccttgttggctgtgggatgcatttatctggcttatacaacatataatacca
ctatgtttgatgttgtcatgggtttattcagtagctatgctcgtacagaaaattgtctat
gaaaaggagaagagattaaaagaggtaatgaagatgatgggcttatcagacagtgtacac
tggtgggcgtggtttataactgccgcggtacagatgactgttaccgtggtaacgctgacg
ttaatgttatattatggacgtgtactatctcatagtaatccagtcatagtgtttatgttc
ctggaaatgtttgccctgtcttctattgccttttcgtttttgattagcagtatgttctcg
cgagctaaacttgctgcagcatgtgcgggtatattttactttataacatacgtaccatac
atgtatatagccatcagagaggatttaacggggaccaggataccagcatacattaaaact
attgctgcaatatttccaacatcagctctgggtctaggtgggaagtatttcctgttttat
gagttagagggttcaggtgtacagtgggagaacctacatgtgtcaccacgggaatatgat
aattttagtctacagattgtgttgataatgatagcagtagacactgttttttactttata
ctggcctggtatatagagaatgtaaatccaggatcttatggtataccaaagccatggtat
tttccattcacaagcacttactggtgtggaacatcactttgggaaacatgtagttttaaa
cgtctgttcggaattcatcgtagcagacgtcgttacaacctcgtaaatgatgatccggaa
aatgatgatgtcactgttgatgatgactcaggtatatattggtgtgggtgtaacacagac
tgtatctgtacatttgaaccggacccacgagacttgacaagaggagtagttgtgaacaac
ttgagaaaggtatacaggaagggagataaaccagcattagacagtctgtctatgaagttg
tatgagaatgagatcactgcgttcctcggtcacaatggtgctgggaaaacaacaacaatg
tcaatattaacaggcatgttcccgcccacatctggtactgctaccatatatggtcataat
gtgatgtcagatatggatactataagacaggatctagggatgtgtccacaatataatgtt
ttgtttgaaagtttgagtgtggaagaacatctttggttttattcacgtttgaagggtgtt
ccagctagagatatacaagaaaatattccaagaatgttgtcagatctcagcctagagaac
aaaggggattcacgcccagatgcactctctggtggcatgcagaggaaactttctatagcc
atagcatttgttggaggatcacgcacagtgatcttggacgagcctactgccggtgtcgac
ccctactcacgtagagccatctggaatctgctcaacaaatacaagacaggaaggacaata
atggtgtccacacaccacatggatgaggcggagactttgggagataggattctaattata
gcagacggcaagctgaaatgtgctggtaccccatcttacctcaagtctaaactaggggat
ggttaccggctctgcattttgaaagatgaagatatgcatactaatgaatctacagagctg
aacagggataaagatgcacaaatccttaccatggtaaaacagatagtcccagctgcgttt
atatccaagcatgtagacaatgaggtccatatcacaatcccagtgcagacggacgaacgt
cacctctttgttccattatttagacttctagagaacaagaaatgtgagctggggatagcg
agttatggtatatcagacagtggccttgaacaggtgtttgtcaagatcacgaaaagttgc
gaggatggcaaaatagctgggactgtctacacggaggcggatgtcactagtaacctgagc
tttgatgaccctggcgttgatagtagtgatagagattatgtccagttacggtctgttgaa
gatatagcggataacatgaacttccaatcctgggacgtacagatggatgaaggacaatgt
aaatggttaaaccattttaaaactgttctgctaaaacgtttcttctatacattacggaac
cggaaagctttactgtcacagataatcttacccgcggtctttgtgtctatctccatgacg
atagcattaactgcaccgaaaaattctgatccggagccacttgttatgtcaactgctcaa
taccacgatctcaccaaaccacgcgggaactttattccattttctattcatacgcttaac
aagacttcaaaacatttaaatagtttgtatgtaacaaagttttcggaaaaattagccgac
acatttttcatgccctctggtataggtgcttcctgtgttttgaaatctaatttatcaggt
gctttatgtgatgggaataatttaacaaacggttgctatgacgatggttgtgatgatata
tttacttccaacagtgtacagagaaatggatggactagttcatcagttcaactaccagaa
aatgttcagttttacccctcttgtcactgtaagtcggacaatgttggttttacttgtaac
gagagaaacacagtcgttccccctgaatggagactggttactggggatatattacagaat
attacaagtggtgtaaatgacgaggaaaactatctgttaaataccaatgataaatacagg
aggcataggtatggaggttttacattcggtaccactttaccctacgtgcctgatacctca
gctgggtcacatgactttacatggctttatgacatgttggcaaccaaagtcatcaataag
gtttggttcaaccagcgtggccatcactccatacctgtttatgtgaactctatgaacaat
gctttattaagagccaatctccatagcaacagccaacaccctgatcaatatggtataaca
ctcacaaatcatcctatgaagaagaccaacaatttactgaactcagactatattcaaggt
ggaacagacgttttgatggcaatatttataattgtagctatgtcatttgtaccagcaagt
tttgttgtgtttctggttcatgaacgtgcaataaaagcaaaacatttacagttttctagt
gggcttcacccagctgtatactggctgtctaattacttatgggatatgtgcaattacatg
ataccagctgtgtgtattctgggaatcctcttgttattccacattgaaagttatgttggc
catggaaatattgaggctgttattgcccttttcttactgtatggttggtcaatcacacct
atgatgtatccagcgagttttttattctcagagccgagtgtggcgtatatatgtttgatt
gttcttaatctgttcactggaataacctgtgtcgtctcgagcgtcatgctaaaacagttt
gcatttgataagagtttagcacatgtaaatgatgtattaagcaacatatttctggtgttt
ccgaactattgcctaggtaacggaatgatgaatattgctataaatcagtacaagaatgaa
tactactctcatataggtgagacaagtaaaatacaggctgcattaagttgggatgttact
ggcaagaaactggttgttatggcaattgttggtgctatatcttttatttttactatcctt
tgtgaatatagattctgcatcaaaaacaggataaaggagaatatttctaatggtgaagac
gtcagtattgactgtgatgtagcacaggaaagggagaacactctaattggacaatacagt
gatacactgttatctgtggagaaacttagtaaagtgtacagaacgaggaaacttggaaag
atacaggcagttaaagagctgagcttttctattccaaaaggagagtgttttggtctactt
ggagttaatggtgctgggaaaacaacaacatttcgtatgctgacgggagatctgacacca
acaagtggtgatgctaaacttctctctcatagtgttgtgaaaggtggacggggtatccag
caatgtgtaggttattgtccccagtttgatgctgtgtttagtgaactaacacccagagaa
catcttcagctgtatgccagactacgaggaatacctgttagacaccataaaaaagtggtg
gagagatgtttaaagttgttaggattaacacagtacagaactaaatctgctggaacattg
agtggaggaaacaaaaggaagctatccactgccattgctctaattggaaacccttctcta
atactcatggatgagcctacatctggtatggacccatattcccgaaggtttctctgggac
gttatacagagacttgtacaagctggaacatctgttgtcttttcctcacatagcatggaa
gaatgtgaaaccttatgttctagattgtctataatggctaaaggacaattgaagtgtctt
ggcagtgtccagcatttaaaggataaatatgcaaatggatatactgtaactgttgtccta
gaatcagaacaggctggtcaaagtgtagaggactatattctctcaaacatgtctggttcc
aagctcaggtataaagggcaccggaacctcgtgtttgacttgaagataacttgttctgac
ctagcagatgtgtataaagtgctgaaagatattccagcctatctgagtgttgctgactac
acagtaaatcaaaactctcttgataatgtgttcataaattttgcaatggaagaaaatgag
tctataatgaaagacactgcagacgacagtgaaccactacaggactccggttgtatacat
gatgaccttgatgatgagtcattgatagaacttcaacctcgtctccatgtgtcgtctggt
gacaacttgctacatgtttga
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integrated database retrieval system
