Ruditapes philippinarum (Manila clam): 132719482
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Entry
132719482 CDS
T09557
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132719482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132719482
Spliceosome [BR:
rphi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132719482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
132719482
NCBI-ProteinID:
XP_060559234
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All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MSLSGREWDDLKSLLDKAVNKFLGFSEPSLVTAALNCIDKGYDERKTSDKLQTILDEKQA
PLFAEKLFDVWDQYRATSKSHRSKRRKFQDDRDDAEDGRKKAKFEEIPVTPEGPSPGQLT
EEKIKEMMQAAQKVIQERKAQMSAQLPSGPPPPSTNSQAQKFMNDAKEKAKRANELQAQI
QARMASLTGLPAPMKGMPPVKSLGEKAVEAQTKSTPSSNPTPLILDSEGRTIDAKTGQAI
TLTHHAPTLKANIRAKRREQFKGLIDAPPEEISASKYFDPRVSLMGAQRQKRGFRFHERG
KFEQLAQRLRTKAQLDRLQSEISHAAKKTGIASAAKLATIAPKKELVEGEIPDIEWWDAY
ILRQIDSYDALSENEDLKARLEGVTHLVEHPIQMKPPAEPDKPPAVPVYLTAAERKKLRR
QNRTEAQKELQEKIRLGLAPPMEPKVRMANLMRVLGSEAVQDPTKVEAHVRAQMAKRQKA
HEEANAARKLTKEQRREKKISKIKEDTSLGVHIAVYRVKDLSNPSKKFKVETNAKQLFMT
GIVVLFKDCNIVVVEGGPKQQRKFKRLMMHRIKWEEDKQRKKKDDDGDAEDADVRNKCVL
VWEGTAKNRAFGEMKFKMCPTEAFAREQFRKHNVESYWDLSFSGAVLETAGEEV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtcaggtagggaatgggatgatttgaagtctttactagacaaggcggtgaat
aaatttctaggattcagtgaaccctcactagtgactgccgccctcaactgtatagacaaa
ggttacgatgaaaggaagacttcagataagttacagacaatcttggacgagaagcaagcc
ccactatttgctgagaagttgtttgacgtctgggatcaatacagggcaacaagtaaatca
catcggagtaaacgtagaaagtttcaggatgatagggacgatgccgaggatggaagaaag
aaagcaaagtttgaggaaattccggttacgcctgaggggccaagcccgggacaacttaca
gaagaaaagattaaagagatgatgcaggcagcacagaaagtaattcaggagagaaaagca
caaatgtcagcacagttgccttccggtccaccgccaccctcgacaaattcgcaggcccaa
aagttcatgaatgatgccaaagaaaaggcaaaaagagcaaatgagttacaggcacagatt
caggcacgaatggccagtctaactggactaccagcacctatgaagggaatgccgcccgtc
aaatcattaggcgagaaagctgtcgaagctcaaacaaaatcgactccatcttcaaatccg
acaccactgattttggacagcgaggggcgaaccattgatgcaaagactgggcaagccatt
accctgacccatcatgcgcctacattaaaggcaaacattcgagctaaaagacgagaacag
tttaaaggtttaatagacgcaccaccggaagagatcagcgcgtccaaatattttgatcct
cgtgttagtttaatgggtgcgcagaggcaaaaaagaggcttccgtttccatgaaagagga
aagttcgaacaactagcacagagattgaggacaaaggcacaactagacagattacagagt
gagattagccatgctgccaagaaaactgggattgcgtctgctgcgaaactcgcaaccata
gcaccgaagaaggaactggttgaaggagaaattccagacatagaatggtgggatgcctat
attttgagacaaattgactcgtatgatgctctttcggagaatgaggatttgaaagcccga
ttggagggtgtaactcatcttgtggagcatccaattcaaatgaaacctccagccgagcca
gataagcccccggctgttcctgtgtatctgactgctgcagaacgaaaaaaattacggcga
caaaacaggacagaggctcagaaagaacttcaggagaaaatacgacttggtttagccccg
cctatggaacccaaagtgagaatggccaacctgatgcgggtgcttggttcagaggccgtt
caggatcctactaaggttgaagcccatgttcgagcacagatggccaaaagacaaaaagct
catgaagaggcaaatgcagccagaaaattaacgaaagaacagaggagagaaaagaagata
tcaaaaataaaggaggacacttcattaggtgtccacatagcagtttatagggtgaaagat
ctcagtaatccatcaaagaaattcaaagtagaaacgaacgcaaagcagctcttcatgaca
gggattgttgtgctgtttaaagattgtaacattgttgtggtagagggaggacctaaacaa
cagaggaagttcaagcgacttatgatgcatagaataaaatgggaggaagacaaacagaga
aagaagaaagatgatgacggtgatgctgaagatgccgatgttagaaataaatgtgttcta
gtgtgggagggaacggcaaagaatcgagcatttggggagatgaagtttaaaatgtgtccg
acggaggcatttgccagagaacagtttagaaaacataatgttgaatcatactgggatcta
tcattcagcggtgctgttttagaaacggcaggagaggaagtttga
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