Ruditapes philippinarum (Manila clam): 132719549
Help
Entry
132719549 CDS
T09557
Name
(RefSeq) cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132719549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132719549
03036 Chromosome and associated proteins [BR:
rphi03036
]
132719549
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
132719549
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
132719549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
NBCH_WD40
eIF2A
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
132719549
NCBI-ProteinID:
XP_060559311
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MIADLTKLDGSLQSGPPQRWRKKASSGLEPGGLSPRLSNRTPGLTPNLPDSAKSVKTPGT
GKASSKTEAALGVPPNKGRWKTPSKTPNKGGQQDRFIPNRATSDMDMAGFAIACGEDEEN
ISPSKVEYRKQLGEAMNIPENTRILSYQKNQPKPAEGHANNLQVIYSKKPYEGPGQGSSR
VIPSVPERILDAPELLDDYYLNLLDWSSNNHLSVALGSSVFIWNASSGIIVQLMTMDEPG
QYISAVKWIEEGSIIGVGTSQGHVELWDVAVQKRIRSMTGHVARVGSLSWNSHILSSGSR
SGVIHHSDVRVADHCVGVLNSHTQDVCGLCWSPDGKFLASGGNDNILNIWNNHLGNDVAP
LLSLTHHQAAVKALSWCPWQPNILASGGGTADRHIRIWNVNTGSNLSSVDAKSQVCAILW
SKEYKELISGHGFSQNQLSIWKYPDLTKVTDLEGHKARVLNLAMSPDNTMVASAAADETI
RIWNCFASDKTKKSISSKPGIQKTEHVLLKASHIR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggacctgaccaaacttgacggctcactacagagtggaccacctcaaagatgg
cgcaagaaggcctctagtgggcttgaacctggaggcttgtcaccaagactttccaacaga
acgccagggctgactccaaatttaccggattctgctaaaagtgtgaagacgcctggtact
ggcaaagcttcaagtaaaactgaggcagctcttggtgtacccccaaacaagggtcgctgg
aaaacaccctcaaaaacaccaaataaagggggacaacaagataggtttataccaaacaga
gcaacttccgacatggatatggctggtttcgccatcgcatgtggggaagatgaagagaac
atatctccatcaaaggtggagtaccggaaacaactgggcgaagccatgaatataccggaa
aatacaaggattttgtcataccaaaaaaaccaacccaagccagcagaaggacacgctaac
aatctacaggttatctacagcaagaagccttatgaagggcctggacaggggtcgtccagg
gtcataccttctgtacccgagagaatccttgatgccccggaactccttgatgactactac
ttaaacttattggactggtcatcaaacaatcatttatctgttgcccttggaagctctgtg
tttatctggaatgcaagtagtggaattattgtacaactgatgacaatggatgagccaggc
caatatatttcagctgtgaaatggattgaggagggatccatcattggtgtaggaaccagt
caaggccatgttgagctttgggatgttgctgtgcagaaaaggataagatcaatgacaggt
catgttgccagagttggctccctttcttggaactctcatatactatcaagcgggtctcgt
tcaggcgtcattcatcacagtgacgtgagggttgctgaccactgtgtgggtgtattaaac
agccacacccaggatgtatgcggactttgctggtcacctgatggaaaatttctagccagt
ggtggaaatgataacatactgaacatctggaataatcaccttggcaacgatgttgcccca
ctgttgagtctcacacaccaccaggcagctgtgaaagctctttcttggtgtccatggcaa
ccaaacattcttgctagtggtggaggcactgctgacaggcacattaggatatggaatgtg
aacactggaagcaatttgtcctctgttgatgctaaatctcaggtatgtgctattttatgg
tcaaaggagtataaagaattgatatcaggacatggcttctcacaaaatcagctgtccatc
tggaaatatccagatctcacaaaagttactgatcttgaaggtcataaggctcgtgtcctt
aacctagcaatgtcaccagataacactatggttgcaagtgctgctgctgatgaaacaata
cgtatctggaattgctttgctagtgataaaactaagaagagtatttcttcaaaaccaggc
atacagaaaacggagcatgttcttctcaaggcatcacatatcagataa
DBGET
integrated database retrieval system
