Ruditapes philippinarum (Manila clam): 132719738
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Entry
132719738 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132719738
04082 Neuroactive ligand signaling
132719738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132719738
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132719738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132719738
NCBI-ProteinID:
XP_060559572
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MLIFVFTSCLTSLLMCCIVCHTIRDTNRLLRDKLADYNKNTRPTFDQSKQTVVNYRLEII
YIQEFDEVKQKFSFNGLPRLSWIDEEMRWNPAEYGGLDSLLTASGPFWKPDLTLANSVGG
LEPISDEEQKIRFLPNGYVSYKPGKLFSSACDVDVTFYPFDIHTCHIIFTPHGHRPDEVL
INVENTKVGQKFFLENGDWKLIDSHINVSLFTFYSELTVYITIERKPRYAIVNVILPIIF
LAYLNNVVFVIPAECGERISYSITVLLAIAVYLTIVGDNLPKTSFPMAYFSYYLLALLIT
SICITLATIFNLRIYHYTTSDPVTGCWEKITSCLICRKTKRKKNEVENTNVKIGIQNLSN
RENMHYDRNRSVHNLYLPSSKQQKRLSDRQQFNLEGTEKGIRGIRRHESDKTLTWKDVSV
ALDKLFFVGFFIIFSAATIFYVLIIVCERKRL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcttcgtatttacgtcatgtctgacgtcattacttatgtgctgcattgtgtgt
cacacaataagagatacaaacaggctgctaagagacaaacttgcagactataataaaaat
acgagaccaacgttcgaccaatcaaaacaaacagtagtgaactatagattagaaatcatt
tacattcaagagtttgatgaagtaaaacagaaattttcgtttaatggtcttcctaggctt
tcttggatagatgaagaaatgagatggaatccggctgaatacgggggattagactctctt
cttacggcgtctggtcctttctggaaaccggatcttactttagccaacagtgtcggtgga
ttagaacctatttcagatgaagaacagaaaatacgctttttacccaacgggtatgttagc
tataaaccagggaagttattttcaagcgcatgcgatgttgacgtaacattttaccctttt
gatattcatacctgtcacataatttttacaccgcacggccatagaccggacgaagtcctt
attaatgtggaaaacacgaaagtaggtcaaaagtttttcttagaaaatggggactggaaa
ttgattgattcacatatcaatgtgtctttgtttacgttctattcagagcttactgtatac
ataactatagaaagaaagccacggtacgccatcgtcaatgtcattcttccgattatattt
ttggcgtatctaaacaacgttgtttttgtcattcctgctgaatgtggtgaaaggatatcg
tacagtataactgttttacttgcaattgccgtatatctaacaatcgttggtgataattta
cctaaaacgtcttttccaatggcatacttcagttactatctacttgctttgttaataaca
agcatttgtataaccctggcaacaattttcaacctgcggatttaccattacactacatcc
gacccagttacagggtgttgggaaaagatcacatcttgtttaatttgcaggaagacgaaa
cgtaagaaaaatgaagttgaaaatacaaacgtgaaaataggtattcaaaatttaagtaac
cgtgaaaatatgcattatgatagaaataggtctgtacataatttatatttacctagctct
aaacagcaaaagcgtctaagtgatagacaacaatttaacctagaaggcacagaaaaagga
atcagaggaattcgcagacatgaaagcgacaaaacattgacatggaaagatgttagcgtt
gccttggataaactcttttttgtaggtttctttattattttttcagcagcaacaatcttt
tatgttctgattattgtttgcgagcgcaaacgtttgtga
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