Ruditapes philippinarum (Manila clam): 132719759
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Entry
132719759 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132719759
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132719759
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132719759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR3_1st
Beta-prop_THOC3
zf-RING_2
zf-C3HC4
WDR55
zf-C3HC4_2
Beta-prop_WDR5
WD40_Prp19
zf-RING_UBOX
WD40_CDC20-Fz
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-UDP
zf-RING_Vps41
zf-Nse
Beta-prop_SPT8
zf-ANAPC11
WD40_WDHD1_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
132719759
NCBI-ProteinID:
XP_060559591
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MADNVDLFEVVPPSPVNTSTQISQRTSRLPLFPRLPSLDLELDISEVDVEPLSPIATVYA
GQRNQNNSGNRTHSTSGSDLSDWLIRERREPNSREVQPGQAGDHVIELLIDDDNSRPSSV
NSEVISIADGSSDIEHISDSGDDVADGDRNDDTVVNRPANPEPPEELGDQAGQISLEDHA
YPSNPSVQTPDVAQALAQVPEPPTVTPVTPRPSIVAPPPIVQVLGGQGQSPADFRSPKRK
RVHSPEKSSVSGDKKVEEDEDEGETCPICFDTWTTSGLHRLCSLRCGHLFGQSCIEKWLK
GQGGKCPQCNAKAKRQDIRVLYAKSIKALDTSERDRALKDLEKERDGKRKAEMEGAQIRL
QYQMTIEENNRLKLEIEMLKSQLRKSGGTGAAGLNVGKKVDSVLTGLKMSQVAGQFVLDK
TIKIWDAGNCRVMAHCPSLATIVASQPSSSPLFPGFGVKKICTLDFKTSQYITIHNKAIR
DVAFHPTVEDGMLLSCGLDKKVKMTSLLSNAVVQTYETAMPAWSCVWNAQDQNYFYAGQQ
NGLVLEFDIRNTEGPVQEFNREGSRSPVASLCYMTEDMSADFRSGGLLIGQLDKLSFFEK
LPNNQHRLHLLPLEGSLTSLHIEPNTRHILASYRPTVRHPTIRHQLCELISRNISTEPTV
IDNVCSCNVIHTFHGGRTQTVLSKTIVQQHPADKSRLLVCAGDETNNSVHLWDSATGQLS
QRLITGGVTVDMCSMNINNTSYLAALTDKQLKVYKWT
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgtggacctttttgaagttgtaccaccgtcccctgttaacacatccaca
cagatctcgcagcgaacaagtagactgccattatttcctagactaccatctctggaccta
gaattggatattagtgaagtagatgtagagccattatcgcccatagcaactgtgtatgca
ggtcaaagaaatcaaaataatagcggcaacagaactcacagtacaagtggatcggatctc
agtgattggttgattagagagagacgagaacctaacagtagagaagtgcaacccggacag
gctggtgaccatgttattgagttactaatagatgatgacaattccagaccatcttcagtc
aacagtgaggttatatctattgctgatggatcgtcagatatagaacatattagtgattct
ggtgatgatgtagcagatggtgatagaaatgatgacacagttgtaaacaggccagctaac
cctgaaccacctgaagagctaggagaccaagctggtcaaataagccttgaagatcacgcc
tatccctcaaacccatcagtccagacaccagatgttgcccaagctcttgcacaggtgcca
gaaccaccaactgtcaccccagttacacctaggcctagtattgttgctcctccacctatt
gtacaagttctcggtggtcaagggcagtcacctgctgattttagaagtcctaagaggaag
agagttcactcccctgaaaaatcttcagtaagtggagataagaaagtagaagaggatgaa
gatgaaggagaaacatgccctatttgtttcgatacatggacaacatctggtcttcacagg
ttatgctcattaagatgtggtcatctgttcggacaaagttgtatagagaaatggttaaaa
ggtcaaggtggaaaatgtccgcaatgtaatgccaaagcaaaacgacaagatatccgagtg
ttgtatgcgaaatctataaaggctttggacacgtcagagagagacagggctctgaaggac
ctagagaaagagagagatgggaaacgtaaagcagaaatggaaggggcacaaatacgctta
cagtaccaaatgaccatagaggaaaataacaggctcaagctggaaatagaaatgttgaag
tcacaactgcgaaaatctggtggtactggtgcagcaggattgaatgtagggaagaaagtt
gacagtgttctaactgggttgaagatgtcacaggttgctggacaatttgtgctagacaaa
acaatcaaaatatgggatgctggtaactgtcgtgttatggcacactgtccgtctctggcc
accatagttgcttcacagccgtcttccagcccactatttccagggtttggtgtgaaaaag
atatgtacattggattttaaaacgtctcagtacataacaattcacaataaagcaattaga
gacgtggcatttcatcccacagtggaagacggcatgttgctgtcgtgcgggcttgataaa
aaagtgaagatgactagtctgcttagtaacgctgttgttcaaacatatgagacggcaatg
ccagcatggagttgcgtatggaatgctcaagaccagaactatttctatgccggtcaacag
aatggactcgttctagagtttgatattcgtaataccgagggcccagtccaagaatttaac
agggagggtagcagatctccagttgcctcactgtgttatatgacagaagatatgagtgca
gatttcagatctggtggtttgttaattggacaattggataagttatcattctttgaaaag
ttgcctaacaaccagcatagacttcatttattgccactagagggcagtctgactagttta
cacatcgagccaaacacccggcatattctcgccagttatcgcccgaccgtccgtcacccg
acaatacggcaccagctgtgtgaattgatctcgagaaatattagcaccgagcctactgtg
atagataatgtctgtagttgtaatgtgatacatacgttccacgggggtcgtacccagacg
gtcctctcaaagaccatcgtgcagcagcatccagctgataagagcaggttactggtctgt
gctggagatgaaactaacaatagtgtccatctgtgggactctgccacaggtcagctatca
cagagacttataacagggggagttactgtagacatgtgttcaatgaatataaacaatacc
tcatacctggctgctttgactgataaacaattaaaggtttacaaatggacctga
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