Ruditapes philippinarum (Manila clam): 132719795
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Entry
132719795 CDS
T09557
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00061
Fatty acid biosynthesis
rphi00071
Fatty acid degradation
rphi01100
Metabolic pathways
rphi01212
Fatty acid metabolism
rphi04146
Peroxisome
Module
rphi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
132719795
00071 Fatty acid degradation
132719795
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
132719795
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rphi01004
]
132719795
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132719795
Enzymes [BR:
rphi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
132719795
Lipid biosynthesis proteins [BR:
rphi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
132719795
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of breast milk
132719795
Exosomal proteins of breast cancer cells
132719795
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
132719795
NCBI-ProteinID:
XP_060559681
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MRGFSRMDDYVLKLVGTGTVVATAAAYMLMNKHKPFNNCDFSEQSIEAEEEKDAKISRQA
KDGKPVAFEEEDVRTLSDAFKRGARLSNNGRCLGWKPSATEPYTWISYNDVLTKASHIGA
GLIAVGQTPENSTHIGIYSQNRAEYFIAEQASYLYSMCIVPLYDTLGVEACNHIIVQAEL
NLIICDKNEKVKNLLGRMSETPNLKTLVVMEKLSEENETLAKQHGVQLMQYEDLEKKGEA
APQEPKPCKPEDLAVICYTSGTTGLPKGAMLTHENCLAPVLACGYIFNNNNLVMTPDDCL
VSYLPLAHSYERLCEACMYSGGGRIGFFQGDVRKLLDDIKELQPTVFPSVPRLLNRVYDK
VMAGASASAVKSRMLAWALSSKEKEVKGGIIRSDSWWDKLVFSKVQQTLGGKVRLITTGS
APLSPKILMFLRCCAGCPVLEGYGQTECSAICSLQVPGDGEIGNVGPPLRCNYVKLVDVP
DMNYMAKDDKGEVCIKGPNVFKGYLKDPEKTKEAMDEDGWLHSGDIGQWMPNGCLKIIDR
KKNIFKLAQGEYIAPEKIENVYVRSTLVAQVFIHGESLKSSLVAIIVPDPDTLPGYAKEK
FNLSVSMEELCKNEDIKKAILDDITSVGKKGGLASFEQAKDIYLHPELFSVENQLLTPTF
KAKRNELKVFFKTQIEDMYKNLQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagagggttcagcagaatggatgattatgtgttaaagttggtaggaactggcactgtg
gtggccactgcagcagcttacatgttgatgaataaacacaaaccgttcaacaactgtgac
ttctcagaacaatcaatcgaagctgaggaagaaaaagatgcaaaaatcagccgacaagct
aaagacggtaaaccagttgcttttgaggaagaagatgtcaggaccttatccgacgcattc
aaaagaggggcaagattgtcaaataatgggagatgtttgggatggaaacccagtgcaact
gaaccatatacatggatatcctataatgatgtgttaacaaaagccagtcatattggagca
ggtctgatagctgttggccaaacacctgaaaattcaacacatattggtatatactcccaa
aacagggcagagtatttcatagcagaacaagcaagttatctatattctatgtgtattgta
cctttatatgatactcttggagtggaagcttgcaatcatatcattgttcaagctgaactc
aatcttataatttgtgataaaaatgaaaaggtcaagaatctccttggtagaatgagtgaa
actccgaatctcaaaactctggttgtcatggaaaaactatcagaagagaatgaaactctt
gccaagcaacatggtgttcagttgatgcagtatgaagatctagagaaaaagggtgaggct
gctcctcaggaaccaaagccgtgtaaacctgaagatttagcagtgatatgttatactagt
ggtacaacaggtttaccaaaaggagcaatgttgacccatgaaaattgtttagccccagtg
cttgcatgtggatacatttttaacaacaataacttggtgatgacacctgatgattgcctt
gtatcttatctgcctctcgctcattcctatgagagattatgtgaggcatgcatgtattct
ggtggaggaaggattgggtttttccagggagatgtgaggaagttgttagatgatattaaa
gaattacaacctacagtattcccttctgtaccaagattactcaacagggtttatgataag
gtgatggcaggagcaagtgctagtgcagtaaagtcaagaatgcttgcatgggcattgtca
tctaaagaaaaggaagttaaaggtggtataatccgaagtgattcctggtgggacaaactt
gtgttcagtaaagtacagcagacactaggtggtaaagtcagattgataaccacaggatca
gctccactctctcctaaaatactcatgttcctcagatgttgtgctggatgtcctgtattg
gaaggatatggtcagacagaatgttctgctatctgtagtctacaggtacctggtgatggg
gaaattggaaatgttggtccaccattgagatgtaactacgtaaagttggtagatgttccg
gacatgaactacatggccaaagatgacaaaggagaggtgtgtataaagggaccaaatgtg
ttcaaaggttatttgaaggacccagagaagaccaaggaagcaatggatgaagatggttgg
ttacactctggagatattggccagtggatgccgaatggatgtttaaagatcatagataga
aagaagaacattttcaaactagcacagggagagtatattgctccagagaagattgagaat
gtgtatgttagatctaccctcgttgctcaagtctttatacatggtgaaagcttaaagtca
agtctggttgctatcattgtacctgatccagacactcttcctgggtatgccaaggaaaaa
ttcaacctgtctgtaagcatggaagaattgtgtaaaaatgaggatattaagaaagcaata
ttagatgacattacaagtgttggaaagaaaggaggattagcttcatttgaacaggcaaaa
gatatttatttacatccggagttgttctctgttgaaaatcaacttcttactccaacattt
aaagcaaagagaaatgagctaaaagttttcttcaagacacagatagaagatatgtacaaa
aatttacaataa
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