Ruditapes philippinarum (Manila clam): 132719800
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Entry
132719800 CDS
T09557
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04136
Autophagy - other
rphi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132719800
04136 Autophagy - other
132719800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132719800
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132719800
Membrane trafficking [BR:
rphi04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
132719800
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132719800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
VID27
EIF3I
WDR90_beta-prop_4th
Beta-prop_Vps41
DUF7165
Beta-prop_NWD2_C
BCAS3_WD40
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
132719800
NCBI-ProteinID:
XP_060559699
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MLYFRSLAVGKKTGYKLFSLSSVEKLDHIYDSNACEDISIVERLFSSSLVAIVSLSSPRK
LKVCHFKKGTEICNYSYSNSILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRDTPPNP
QGLCALSINNDNCFLAYPGSNQIGEVQIFDTINLRAVTMIPAHDNPLAAITFNAQGTKIA
TASEKGTVIRVFSVPDGSKLFEFRRGMKRCVHIYSLAFSSDSIYLCASSNTETVHIFKLE
TQKDTKPQEDQSGWMSYVNTATKQLTTYLPSPVTDMFNQGRAFAVCKLPNQGLKNVCAIA
SVREAQSIQKIPRLLVASQDGYLYIYNLDPNDGGECTLLRQHGLDGRLCEGGNVSEPPTG
SSDRPLTQQSNPVSYAGSLKRAEPAGDGTPPRHNADSQPFQEFDQGATGQDVAAGTGLNA
LRLDDDNEFPPMTHKVD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgttatatttcagatccttagcggtaggcaagaaaactggatacaaattgttttcatta
agttctgtggaaaaacttgaccacatttatgatagtaatgcatgtgaagatatcagcatt
gtggagagattattctccagtagtctggttgccattgttagtctttcatcaccaaggaaa
cttaaagtctgtcattttaagaagggcacagaaatatgcaactatagctactctaattct
atattagcagtaaaattaaatagacagagactgatagtatgtttggaggagagtttatac
atacacaacataagagatatgaaagttctacatactatacgtgataccccacccaatcca
caaggtttatgtgcactctccattaacaatgataactgtttcctagcttaccccggtagt
aaccagattggagaagttcaaatatttgatacaataaatctgcgagctgtcacaatgata
ccagcacatgataaccccttagctgccataaccttcaatgctcaaggaacaaaaatagca
actgcttcagaaaaaggtactgtgatacgagtgttctctgttcctgatgggtcaaaatta
tttgaatttagaagaggaatgaaaagatgtgtacatatatactcattggcatttagttca
gattctatatacctatgtgcatccagtaatacagagactgttcatatatttaaattagaa
actcaaaaagacactaagccacaagaagaccagtctggatggatgagttatgtgaataca
gccaccaaacagctgacaacatatttacctagtcctgtcactgatatgtttaatcaaggc
agagcttttgctgtctgtaaacttcctaaccaaggccttaaaaacgtgtgtgcaatagct
agtgtaagggaagcacagagtatacagaaaatccctcgcctgcttgtagcttcccaagat
ggatacctgtatatatataacctagatcctaatgatggaggggagtgtactcttcttaga
caacatggtttggatggacgtttgtgtgagggaggtaatgtttctgagccccctactgga
agttctgatagaccactaacccagcaatcaaaccctgtcagctatgcaggttcactgaag
cgtgcagaaccggcaggagatggtacaccacctcggcacaacgcagattctcagccattc
caagagtttgatcaaggggccacgggacaggatgtagcagctgggacaggactgaatgca
ttacgattggatgatgacaatgaattccctcccatgacccataaagttgattga
DBGET
integrated database retrieval system
