Ruditapes philippinarum (Manila clam): 132719859
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Entry
132719859 CDS
T09557
Name
(RefSeq) partner of Y14 and mago-like
KO
K14294
partner of Y14 and mago
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132719859
03015 mRNA surveillance pathway
132719859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132719859
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132719859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago-bind
CHD1-like_C
DUF6594
Motif
Other DBs
NCBI-GeneID:
132719859
NCBI-ProteinID:
XP_060559775
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MATNMVERTGVVQDESTGEMFIPATRRPDGTWRKPRRVKDGYVPQEEMPVYENKGVQWLK
SKPSLPPGLDSSEGSVKTQVNSSEPMSKAAKKNAKRKEKKKQQQDGNQSGTSIQNVTQSL
AGININKDQSGAKSKNTDQSDSQVTKQSGESSDKQEIAKKLKNLRKKLKQIEDLEKKIQS
GELKNPEKEQLEKIGKKKMILEEIEDLELDLDD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatatggtagaaagaacaggagtcgttcaagatgaaagtacaggtgagatg
tttataccagcaaccagaagaccagatggcacttggaggaagccaagaagagttaaagat
ggctatgttccgcaggaagaaatgcctgtgtatgagaacaaaggtgttcagtggctgaag
agcaaaccttctttaccacctggattagactctagtgaaggaagtgtaaaaacacaagtc
aacagcagtgagccaatgtcgaaagctgccaagaaaaatgccaagagaaaagagaaaaag
aaacaacagcaagatggtaaccaatcaggaacttccattcaaaatgtcactcagtcattg
gctggaattaatataaacaaggaccaatcaggtgcaaagtctaaaaatactgaccaatca
gattctcaagttactaaacagtctggggagagtagtgataagcaagaaatagctaagaaa
ttgaaaaaccttagaaagaaattaaaacagattgaggatttggaaaagaaaattcaaagt
ggtgaactaaaaaacccagagaaggaacagttggagaaaattggcaaaaagaagatgatt
cttgaagaaatagaagatcttgaactagatctggatgattga
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