Ruditapes philippinarum (Manila clam): 132719869
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Entry
132719869 CDS
T09557
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132719869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132719869
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
132719869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Rad54_N
SLFN-g3_helicase
zf-Tnp_2
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
132719869
NCBI-ProteinID:
XP_060559787
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MRRSHAPSQLGLMPKRKSDEFGDAEVRKETGCNRTKKHCTLDVGSPQQYLSPFRKPLESI
QNVPDKTATGLSSHEAFIRKILSKPFKVPIPNYTGSSLNKALGVRRQGARQPLHDPFEDG
ALVLYIPPELSAHDQLKIDVEKQPVHIVVDPILSKVLRPHQREGVKFMYDCVVGVQIPDN
YGCIMADEMGLGKTLQCITLAWTLLRQSPDCCPTIEKAVIVCPSSLVKNWYNELNKWLGT
KINALAVDSGSKSDIDRNLSEYFILSVISHVHRMHKVRKFGLVICDEGHRLKNSENQTYQ
ALTGLNCRRRILLSGTPIQNDLLEYFSLIHFVNKGILGTAQEFKRKFETPILRGRDSTAS
DGDHKKGMEKLQELATIVNRCIIRRTQALLTQYLPVKIEEVICIELTPVQKEMYKHLVQS
KSAECLQKAEAGNQSAGSLSFITQLKKLCNHPDLIYEKCVEEADGFEGMIDMFPAGHNLR
TVKPELSGKFLVLDCLLAMIKSSSSDKVVLVSNYTQTLDLFEKLCRLRGYIFVRLDGSMT
IKKRAKVVESFNNPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARCW
RDGQKKNCFIYRLLAAYNFSSNRETTEMKLFTSEHFINLLYYHLMILYGGVVKVTNSNSS
VCTVIRLNTGTMNSFMFKCRRCVNNIQVKPPSDDSDCNSDLSQWHHSTDKKGLKDLMLKG
AWSSDTPISFVFHHHSHEQQRVTV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgttcacatgctcctagccaactgggtttgatgcctaaaagaaaatctgatgaa
ttcggagatgctgaagtaagaaaggagacaggatgcaataggaccaaaaagcattgcaca
ttagatgttggcagtccacaacaatatctttcaccatttagaaaaccattagagagtata
cagaatgtccctgataaaacagctactggcttgtctagtcatgaagcatttataagaaaa
atactctctaaaccatttaaagtaccaattccaaattacacaggttcctctttaaacaaa
gcattaggagtaagaagacagggggcaagacaacccttacatgacccctttgaagatggt
gcacttgttctttatataccaccagagttgtctgcccatgaccaacttaaaattgatgtt
gagaagcagcctgtacacattgtggtggatccaatactgtcaaaggttcttcgaccacat
cagagagaaggggtgaagtttatgtatgactgtgtagttggtgtacagataccagacaac
tatggttgtatcatggctgatgaaatgggtttagggaaaacactacagtgtattacattg
gcatggaccttattgcgacaaagtccagactgctgtcctacaatagagaaagctgttata
gtttgtcctagtagtttggtcaagaactggtacaacgagctgaataaatggttgggaacg
aagataaatgcactagctgttgacagtggttcaaaaagtgatattgatagaaacctgagt
gagtattttatactatctgtgatctcacatgtacacagaatgcataaggtgagaaagttt
ggactggttatctgtgacgagggtcacaggttaaagaatagtgaaaaccaaacataccaa
gctttgactggtttaaactgtagacgtagaattttgttatctggtacacctatacaaaat
gacctactagaatacttcagtcttatacattttgtaaacaagggaattctaggaactgcc
caggaatttaaaagaaagtttgagacaccaatcttgagaggtagagactctacagcatct
gatggggaccacaaaaaaggaatggaaaaattacaagaactggccaccattgtaaacaga
tgtataatcagaagaacacaggctttgttaacacagtatttacctgttaaaattgaagaa
gtaatttgtatagagttgacaccagtccaaaaagaaatgtataaacatttggtccagtct
aaatcagcagaatgcttacagaaagcagaagcagggaaccagtctgccggcagtctgtca
tttatcacacagcttaaaaaattgtgcaatcatcctgatcttatttatgagaaatgtgtt
gaagaggctgatggttttgaaggaatgattgatatgttccctgctggtcataatctcaga
actgtcaaaccagaactctcaggaaagttcctagtattagactgtttattagctatgata
aagtcttccagcagtgacaaagttgtcctggtatccaattatacacagactcttgacttg
tttgaaaaactctgtagattgagagggtatatatttgttagactggatggatcaatgaca
attaagaagagagctaaagttgtagaaagcttcaataatccaactagtcctgagtttata
tttatgctgagtagcaaggcaggtggttgtggtttaaatcttattggtgcaaatcggctg
gtgatgtttgatcctgactggaacccggctaacgatgaacaagctatggctcgttgctgg
agagatgggcagaaaaaaaattgtttcatttatagattattggctgcttacaatttctct
tcaaatagagaaacaactgaaatgaaattgtttacatcagaacatttcatcaacttgtta
tattatcacttgatgatcctctatggtggtgtggttaaggtcactaactcgaattcatct
gtctgtactgtgatcagattaaatacagggactatgaattctttcatgtttaagtgtaga
agatgtgtgaataatatacaagtaaagcctccatcggacgactcggactgtaattctgac
ttgtctcagtggcatcattctactgataaaaaaggtttaaaagacttgatgttgaaaggg
gcgtggtcatcagacacacctatatcatttgtgtttcaccatcattcacatgaacaacaa
agagtgactgtataa
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