Ruditapes philippinarum (Manila clam): 132719992
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Entry
132719992 CDS
T09557
Name
(RefSeq) autophagy-related protein 13-like
KO
K08331
autophagy-related protein 13
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04136
Autophagy - other
rphi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132719992
04136 Autophagy - other
132719992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132719992
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132719992
Membrane trafficking [BR:
rphi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
132719992
Atg1 complex
132719992
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132719992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
tRNA_m1G_MT
New_glue
Motif
Other DBs
NCBI-GeneID:
132719992
NCBI-ProteinID:
XP_060559950
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
FQFNIAITDNNEVHTEAKKVVSNQTSTLAQNVCVEISLRTADGDTMVLELWYISLDINQC
DISAKMSQTGYSRMSIALKSLLNVSRVTPAYKLSRRQTSSDYIICYRIYLGEPQFYILGE
NHQKSKVGSVPTPYGTIGIHLGYRTKLLISPQNTTKEVPFEVKDDHFKQDSSPVRPTTPK
PCVSGYRRQSTCDSDSTGQSEESCTTTFSTSPCGEPLRTKGSPASHHQSQPIKINIQGSS
PVTDKFPDLRPQSAPEKPFTYQDCHRVGAFVQHFTDNKHNSDDDVPFLSLLQQVKLDRQD
KDKTDGTKLEASKVTSSSKTESSRETSESALSESKTSTSSQVSAPDDFVMVELKTPFAGA
DANSDLGRFYRECQSAPALTNCDEEQSVPEALEQLTNQLESFETHMKDFDNFVSELNIDN
ESMGFEAKAVFET
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
tttcagtttaacatagcaataacagacaataatgaagttcacacagaagccaaaaaagtt
gtgtcaaatcagacgtcaacacttgcacagaatgtctgtgtggagatctcacttaggact
gccgatggtgatacgatggtgcttgaactttggtacataagtctggatataaatcagtgt
gatataagtgctaaaatgtcacagacaggttattctaggatgagcatagcattaaaatca
ttattaaatgtttctagagttacacctgcttacaaactctctcgaaggcagacaagcagt
gactacataatttgctatagaatatatcttggcgaaccacagttttatattcttggtgag
aaccatcaaaaatcaaaagtagggtctgtgccaactccatatgggaccataggaattcat
ttaggctacagaacaaagttgttgatatctccacagaacactacaaaagaggtgccattt
gaggtgaaggacgatcattttaaacaagatagtagtcctgtaagaccaacaacaccaaaa
ccttgtgtatctggttacagaaggcaaagcacttgtgattcagactctacaggtcagagt
gaggaatcatgtacaacaacattttctactagtccctgtggtgagcctctaagaactaaa
ggaagtcccgcctctcatcatcagtcgcagccaataaagatcaacatacagggcagttct
cctgtgactgacaagttccctgatttaaggccacagagtgctccagaaaagcctttcaca
taccaagattgtcatagagttggagcatttgttcaacattttacagacaataaacacaac
agcgatgatgatgtgccgttcctatctctcttacagcaggtcaaacttgatagacaagac
aaggacaagacagatggtacaaagttagaggcatcgaaagtcacgtccagctcgaaaact
gaaagttcacgggaaacaagtgagtctgcgctaagcgagtccaaaacaagtaccagtagc
caggtgtcagcaccagatgactttgttatggtggagttgaaaacaccatttgctggagca
gatgccaatagtgatttaggacggttttatcgagaatgtcagagtgcaccggcattgaca
aactgtgacgaggagcagtcagtaccggaagctttggagcagttaactaaccagctagaa
tcatttgagactcatatgaaagactttgataactttgtgtcagaactgaatattgacaat
gaatctatgggttttgaagctaaagctgtttttgaaacgtga
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