Ruditapes philippinarum (Manila clam): 132720028
Help
Entry
132720028 CDS
T09557
Name
(RefSeq) inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1
KO
K24513
inter-alpha-trypsin inhibitor heavy chain H3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rphi00536
]
132720028
Glycosaminoglycan binding proteins [BR:
rphi00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
132720028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIT
ITI_HC_C
VWA
VWA_2
VWA_3
SP_0191-like
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
132720028
NCBI-ProteinID:
XP_060559990
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MNAFISMMSVKCSILSLTILVLVVPAKFQSPSIYSLHIRTDVQYRFATTLVTSRVANPAN
YTQETVFNVFLPEEAFISNFTLEIDGQIYPGIVKDKGEAKKDYERAKKRGQTAGLVSQKP
RESRKFNVKISVAAFSKSTFNLTYQELLKRVKGAYEHKIFINPGYPVKDFKVTVAILESR
DITKLVVPPIKALKHLLTENEEVKENALAVITRPTSRSAIIQYSPTLDDQGTDGVSGQFI
VQYDIDRSLDGGDILVVNGYFVHFLAPEVKTVIPKDVLFILDVSGSMGGRKIEQLKDAMF
IVLDELKEGDRFNIITFSQSAKTYKPGMIDVTQREVLDAKTFTKGMTYGGSTNINEAVLK
GLELLRNSRQEDERSPVIVFLTDGRPTTGRETNPNSILRNIDVGNEGEVPIFSLAFGKDA
DWNLMKSMSIRNDGIARKIYEDSDSDLQISGFYDEIAVTLLNNVTVKYIGDTVDPSSLTK
SEFKNYFEGSELVVAGKLTDPGAPTFDLQILSNSLDGTLVLNVDKDSNYIDVSETESLME
LTDFQEITEKTWAYLTIKQLLYRADGEIDDTVKEALQNRAKDLSLQYGFVTPLTSMVVTK
PEVEPIPTEPPQDVEDLKPDRSALRLRGPFGVIKNNPKMSADNDPHFIINIKGLDNAVCF
DVMGNEGDVYTLVNDKYSGLAIDAKVVANKMIKTTTKYEFKSGDIKTYLGEITIKRWRSE
LLVTPTNITFTGETVHWMNGTFLNLGTAIIVFNKDGSELMVKFEDRITIVIMRHLKSRSL
LRAGKVNFLGIYIVEHQGLSYHTHGILGQFLHRKVVLKKTKSHQGKLMGQLRVSGNTQKP
RRLMATLGSRLNPASNATVRCWMVQHNGGALLDGNISDYLVQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatttatcagtatgatgtcggtcaagtgttcaattctttctctgacgattcta
gtacttgttgtcccagcaaagtttcagtctccaagcatatactcccttcatattagaacc
gatgttcagtaccgctttgctactacactggtcaccagccgagtggccaacccggctaac
tacacacaggagactgtcttcaatgtcttcctaccagaggaggcctttatttcaaacttt
actcttgagatagatggtcagatatatccaggtatagtaaaggacaaaggtgaagcaaag
aaagattatgagagagcaaagaaaagaggacagacagccggacttgtcagtcaaaagcca
cgggaatccaggaagttcaatgtcaaaatatcagttgccgccttcagtaaatctacgttc
aatttaacataccaggaactacttaaacgtgtcaaaggggcgtatgaacacaagatattt
ataaaccctggctatcccgttaaagattttaaggtcacagtagccattttggaatcacgt
gacattacaaagctcgtggttcccccaatcaaagctttgaaacatttacttacggaaaac
gaagaggtaaaggaaaacgcgctcgcggtaataacaaggcctaccagtagaagtgcaatc
attcaatattcaccaacgttagacgatcaaggcacggacggtgtgtctggacagtttatt
gtacaatatgatatagataggtcactggatgggggagatattttggtcgtcaatggatat
ttcgtgcattttcttgccccagaagtaaaaacggttattccgaaagacgtcctctttatt
ttggatgtcagtggttcaatgggtggacggaaaatcgaacaactaaaggatgctatgttt
attgtactagatgagctgaaggagggagaccgatttaatataataacatttagtcaaagt
gctaaaacgtacaagccgggtatgatagacgtaactcagagagaggttcttgatgcaaaa
acgtttactaaaggaatgacttacggtggctcgacaaacattaatgaagctgtactgaaa
ggtctggagctactccgtaactcacggcaagaagacgaacgatccccagttatagtgttt
ctaacagacgggcgaccaacaacaggcagagaaacaaatccaaattcaatattgagaaac
atcgatgttggcaatgaaggagaggtaccgatatttagtctagcatttggcaaagatgct
gattggaatctaatgaaaagtatgtccattcggaatgacggtattgccagaaagatatac
gaggactctgactcagatttgcagataagtggattctacgatgagattgctgtaacgtta
cttaacaacgtgacagttaaatatatcggtgacactgtggacccttcgagtctgaccaag
tcggagtttaaaaattatttcgaagggtccgaacttgtcgttgctggtaagttgactgat
ccaggggctccaacttttgacctgcaaatcctaagcaacagtctcgacggaactttggtt
ttaaatgttgataaagactccaactacatagatgtctctgaaactgaaagcctgatggaa
ctcaccgatttccaagaaataacggagaaaacatgggcgtatcttacaataaagcaatta
ctttatagggctgatggagaaatcgacgatacagtaaaggaagctttacaaaatagggcg
aaagacttgtctttacagtatggctttgtaacaccgttgacttcgatggttgtgacgaaa
cctgaagtggaaccaataccaacagaaccaccacaagatgttgaagaccttaaaccggat
agatctgctttaagattgcgagggccatttggggtgatcaaaaataatccaaaaatgtcg
gctgacaacgatcctcattttataattaacataaaaggtcttgataatgcagtttgtttt
gacgtcatgggaaatgaaggtgacgtctatacacttgttaatgacaaatatagtggttta
gcaatagatgcaaaggtagttgccaacaaaatgattaaaacgacgacaaagtatgagttt
aagtctggtgacataaagacttaccttggcgagataacaattaaaagatggcgatctgaa
cttctcgttacaccaacaaatatcacatttacgggagaaacagtacactggatgaatgga
acgttcttaaatcttggaacggccataatagtttttaacaaagatggctcggaattgatg
gtaaagtttgaggacaggataaccattgttataatgagacatctgaagtcaaggtcattg
ctccgggcgggaaaagtcaactttctaggcatatatatagtcgagcatcaaggcctatct
taccacacgcatggaattctaggtcagttcttacataggaaagtcgtgttgaagaaaacg
aaaagtcatcaaggaaaattaatgggtcagttgagagtaagtgggaacacacagaagccc
cggagacttatggcaactttaggctctcgactcaatcctgccagcaatgccactgtccgg
tgctggatggtacaacataatggcggtgctcttctcgatggaaacatttcagattactta
gtacagtaa
DBGET
integrated database retrieval system
