Ruditapes philippinarum (Manila clam): 132720076
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Entry
132720076 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5-like
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132720076
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132720076
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132720076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Peptidase_S31
Motif
Other DBs
NCBI-GeneID:
132720076
NCBI-ProteinID:
XP_060560050
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MMLKSLLFNVWIILCSDFLCFVSSWNVTHTNITSYYMTLKDLYNKSTSNTSGSVPMQDFI
PKQYPEDTMNVQLDIELYSLNDFDEVSGSIDIMLRFNMSWFDEIAACNGMDMDDAFPLDR
STPDRLKWLQVPHGTIWTPYLILLNSVDSLENVGGMAFKPRFNLERGQVKWNPIIKVPSA
CSPDVTYYPFDRQICRFTFTAWGYTGYELYFEPFKSTWGNDSYEENGEWSLIYTKTETSA
SNSDTEPTITLTLTIERKPLYFAFNIILPILVLAILNALVFCLPIESGERVGFSVTCFLS
FVVLLNMIMDIMPRSSSPMAYLCFYTVSMMIFSGLNTGFVILQMKLYHKPDTEEVTRCIV
VFIKFLKCKYIRDKKKSCSCIKGRDKIHSENDLKVEEIDSDSVMDYTDMAEGKADITWQQ
VASFLDKFFFLAFLGVQIFFSMCFLLPIGARA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaaatctttgctgtttaatgtttggataatcttgtgctcagactttttgtgt
tttgtaagcagttggaacgtgacacacacaaatattacgtcgtactatatgacgctgaag
gatctgtacaacaagagtactagcaacaccagtggtagcgtacctatgcaggactttatc
ccgaagcagtatccagaagacacaatgaatgttcaacttgacattgaattgtactccttg
aacgactttgacgaagtatccggctcaattgatataatgctccgattcaacatgtcatgg
ttcgacgagatagccgcctgtaatggtatggatatggatgatgcatttccattggatcgt
tcaacgccagataggcttaaatggctacaagttccccatggaactatctggacaccttat
ttgatattgttaaactcggttgattcattggaaaatgtcggaggtatggcgtttaagcca
aggtttaatctagaaaggggacaggtgaaatggaacccgatcattaaggttcccagtgca
tgctctccggatgtgacatactatccttttgacagacaaatctgccgatttacatttaca
gcttggggctatacagggtatgagttgtacttcgaaccgtttaaaagtacatggggaaat
gattcatatgaggagaatggagagtggagtttgatttatacaaaaaccgagacctcggcc
tcaaattctgatactgaaccaacaattactttgacgttaactattgaacgaaagccatta
tattttgcgttcaatattattctacccatactggttcttgctatcctgaatgcattggtg
ttttgcctgcccattgaatctggtgagcgtgtcggattttctgtgacgtgctttttgtca
tttgtcgttctgttgaatatgatcatggacataatgccacgttcttcttcaccgatggca
tatctttgtttctacaccgtttcgatgatgatatttagtggactcaatacaggatttgtc
attcttcaaatgaaactataccataaaccggacacagaggaagttacacgatgcattgtt
gtttttataaagttcctaaagtgcaaatacattagagataagaagaaatcttgctcttgc
ataaaaggaagggacaaaattcactctgaaaatgaccttaaagtggaagaaattgactca
gatagtgtaatggactacacggatatggctgaaggtaaagcggacatcacctggcaacaa
gttgccagctttttggataaattcttttttcttgcattcttgggtgttcagatctttttc
agtatgtgttttctcttgcccattggagcaagagcttaa
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