Ruditapes philippinarum (Manila clam): 132720236
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Entry
132720236 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: ruvB-like 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
rphi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132720236
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132720236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132720236
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rphi03037
]
132720236
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
132720236
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
132720236
Chromatin remodeling factors
SRCAP complex
132720236
INO80 complex
132720236
INO80 complex (yeast)
132720236
SWR1 complex
132720236
ASTRA complex
132720236
Cilium and associated proteins [BR:
rphi03037
]
Motile cilia and associated proteins
Dynein assembly factors
132720236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
RuvB_N
AAA
AAA_22
MamS_MamX
nSTAND3
bpMoxR
Motif
Other DBs
NCBI-GeneID:
132720236
NCBI-ProteinID:
XP_060560311
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MKIEEVKSTTKTQRIATHSHIKGLGLDENGYAIQSAAGLVGQELAREAAGIVVEMIRSKK
MAGRAVLLAGPPGTGKVCHALVLAQKIWARKFSICPRGRXXIYSHEIKKTEVLMENFRRA
IGLRIKETKEVYEGEVTELTPVETENPMGGYGKTVSHVIIGLKTAKGTKQLKLDPSIYES
LQKEKVETGDVIYIEANSGAVKRQGRSDSFATEFDLEAEEYVPLPKGDVHKKKEIIQDVT
LHDLDIANARPQGGQDIMSMMGQLMKPKKTEITDKLRKEINKVVNKYIDQGIAELVPGVL
FIDEVHMLDIECFTYLHRALESSIAPIVIFATNRGKCTIKGTEDIVSPHGMPLDLLDRVM
IVRTLPYSQEEMTQILKLRAQTESIQVDDESLNQLGQIGTTTTLRYAVQLLTPANLLSKI
NGRDTIGKDEIEETNKLFFDAKSSAKILAEQEDKYMK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaagaagttaaaagtaccacgaagactcaaagaatagcaacacatagtcac
attaaaggcttaggattagatgaaaatggttatgctattcaaagtgcagccggtcttgtc
ggtcaagaattggcaagagaggctgcaggtattgtggttgagatgataagatcaaagaaa
atggcaggacgtgctgtattgttagcaggacctccaggaacaggcaaggtttgccatgca
ttggttttagctcaaaaaatttgggccagaaaattttccatttgcccaaggggtaggtag
tgaatttactcacatgagatcaaaaagacagaagttctgatggagaattttaggagagct
ataggtttaaggatcaaagaaacaaaagaagtttatgagggggaagttacagaattaaca
cctgttgagacagaaaatccaatgggaggctatgggaaaacagtcagtcatgtaatcatt
ggtttaaagacagcaaaaggaacaaaacagttaaaactggatccatcaatatatgaaagt
ttacagaaagagaaagtcgagactggggatgtaatatacattgaggcaaacagtggagca
gtcaagagacaaggtagatctgatagttttgctacagagtttgatctggaagccgaggag
tatgttcctctacctaaaggagatgtacataaaaagaaagaaattatacaagatgtaaca
ttacatgatctcgatatagctaatgctagaccacagggaggtcaggatattatgtctatg
atgggtcagttaatgaagccaaagaaaacagaaattacagataaattaagaaaggagatc
aacaaggtggtgaacaaatatatagatcaaggtatagctgagcttgtaccaggtgtatta
tttattgatgaggttcacatgttggatattgaatgtttcacctacctccacagagctctt
gaatcatctatagcacccattgtcatatttgctacaaacagaggcaaatgtaccatcaaa
ggaacggaggatattgtctcaccacatggaatgccattagatctgttagacagggtgatg
attgtacgaacacttccttactctcaggaggaaatgacacagatcttgaagttaagagca
cagacagaaagtatccaggtagatgatgaatctctaaatcagcttggacagattggtacc
accacaacgctcagatatgctgtacagctgctcaccccagctaacttattgtcaaaaatt
aatggacgagataccatcggaaaagatgaaatagaagagacaaataaacttttctttgat
gcaaaatcctccgcaaaaattttggccgaacaagaagataaatatatgaaatga
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