Ruditapes philippinarum (Manila clam): 132720286
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Entry
132720286 CDS
T09557
Name
(RefSeq) nuclear receptor coactivator 7-like isoform X1
KO
K25442
nuclear receptor coactivator 7
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
132720286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132720286
Membrane trafficking [BR:
rphi04131
]
Endocytosis
Others
Others
132720286
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OXR1_M
TLD
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-GeneID:
132720286
NCBI-ProteinID:
XP_060560369
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MSKKGTIIDKLGFGSFRLRGNPQQTYGEDLDLKTGGGNGQTSVNTITGGELDLPMEIVSR
YSSENLEALVSKPHKKTLREKIWGSRHEESPVNSSKSVFYVDEAPVMVTTATEEDNNETT
AGQEKKKKHQPEGTVEYTVQDRDTLEKIAAHFDTTPSELKKLNKLISAMIFAGQVLYIPD
KEYVPRKSTSSVSSEDSSSQHQGDSVFGSPQDKPKMDVPLVRSGNNSPSKVPGHVERQPA
SPTAFDFEVVAPHKLSEDEVQQLDQDCMERFIKLKVKHITDGQMYKTDPKQGVVKGTLLV
TPNAVMFDPDVSDPLVLEHGAEKYGMIAPMDMIISAAMYHDIAAMKLRGKKQEDGTNYPR
PEVYHDKACPMAKEKLLSSQKTDQSKHSSTSLSENLKNILRNPLNKSESVCSCGKGVNSD
KLDSVSGDETDGLNLHEELNKGRPDEAHSNGESGDKSMNDNVFSDGNNGDTDTIDNSVEE
VDSSGNGTRVKSSPRLDSRGQKKLSVSFSLPETDTVSPGKEKISPGLETLLDLEDTGVTN
TDKDKELVDIGNEQESAKSQPSDKTQSDDEYSSNGDKETRIGNIVYLPVEEDANGEVTVQ
SVEKTANTLSKLSVDEFSQISKSDTDLVDSGLSIENKEVEKTRSSSTSSLGPFSPTPHLS
AFVNYATGFFQRHASDSSIKDIKDVIIDSLPDLKMPESIIDSKDSKDETKFDVPTVSAAP
TPAGRRGKMSRHGNLAQPAGNVAVENAVTMDEKPDLMTMDYDKFAPRKSQAYPDPPLYLC
LRLGTPQNKNVFHNYSIESYGRRRKKSEYWFSIPREKVDHLYAFFVQWTPEIYGDEEEIT
PEKRGFVVIEDDESEDLEMLDEHFGPNSTFAKDWEMINKRQRIISQSEAIKRRSIVYEEP
IPLPELIGESTILKEFHISELCQVMPGRTVGYPWTLIYSTDKHGFSLKTLYRDMVGLESP
ILIAVKDTNDNIFGALTSCQLKYSDSFYGTGETFLFTFYPEFKVFNWTGENNFFIKGNQE
SLSIGAGQGVFGLWFDEDLYHGRTNKCETFDNDLLTSSEDFVVKGVEAWAFIWD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaagggacaataatagacaaacttgggtttggatcattcagattacgtgga
aacccccaacaaacatatggtgaagaccttgaccttaaaacaggaggtggtaatggccag
acatcggtgaacactatcactggtggtgaacttgacttaccaatggagatagtgagtcga
tattcgagtgagaatttagaggccctcgtcagtaaacctcacaaaaagactctcagggag
aaaatatggggttcaagacatgaagaatctccagtaaattcatccaagtctgtgttttat
gttgacgaagcaccagtcatggtaaccacggcaacagaagaagacaacaatgaaacaacc
gcgggacaagagaagaaaaagaagcatcaacctgagggcaccgtggaatatacggttcaa
gatcgtgacacgcttgagaaaatagcggcacattttgacaccacaccgtcagagctgaaa
aaactcaataaactcatatctgctatgatatttgctggacaagttctttatataccagat
aaagaatatgttcctagaaaatccacgtcatctgtgtcttcagaagattccagctctcaa
caccagggggattctgtgtttggtagtccccaggacaaacctaagatggatgtacctcta
gtccgatctggcaacaactccccgtcgaaggtaccgggacatgtcgagcgacagccagct
tcaccgactgccttcgactttgaagtcgtagccccgcacaaactgtccgaggacgaagta
caacagttagaccaggactgtatggagagatttataaaactcaaagtgaaacatataaca
gatgggcagatgtataagactgacccaaagcagggtgttgtcaaaggtaccttgcttgtg
acccctaatgctgtaatgtttgatcctgacgtgtccgaccccttggttctggaacacggt
gccgagaagtacggtatgattgcacccatggatatgatcattagtgcagccatgtatcat
gatattgctgccatgaaattacggggaaaaaaacaggaagatggaacaaattatcctagg
ccagaagtatatcatgacaaagcatgtccaatggctaaagagaaactcttatcctcacaa
aaaactgaccaatccaaacacagttccacctccctctcagagaatctaaaaaacattctg
agaaatccattaaacaagtctgagagtgtttgttcttgtggtaaaggtgtaaatagtgac
aaactagattctgtctctggtgatgaaactgatggtctcaatcttcatgaagagttaaat
aaaggtaggcccgacgaagctcattccaatggcgaatctggtgataaatctatgaatgac
aatgtgttcagtgatggtaataacggtgatacagacacaattgataattctgtagaggag
gtggatagtagtggcaatggaacaagagtgaaatctagtccaagacttgattccagaggg
cagaaaaaattatcagtttctttttctctgccagagactgacacagtgtcccctggaaag
gagaaaatttctccagggttagaaactttactggaccttgaagatactggtgtaacaaac
actgataaagataaagagcttgttgatattggaaatgagcaagaaagtgctaagtcacaa
ccaagtgataaaactcaatctgatgatgaatactcttcaaatggagataaagaaacaaga
ataggtaacattgtttaccttcctgttgaagaggacgcaaatggggaggttactgtgcaa
tcagtggagaaaactgcaaacacattatcaaaattaagtgttgatgaattttcccaaatt
tctaagtctgatacagaccttgttgatagtggtttaagtatagagaataaagaagtggag
aaaacaaggtcatcttcaaccagttctttagggccattcagcccgacacctcatctgagt
gcttttgtaaactatgcaacaggtttcttccaaagacatgcttcagatagtagtatcaaa
gacattaaggatgtgataatagattcattaccagacttaaaaatgcccgagtcaataata
gattctaaggatagtaaagatgaaacaaaatttgacgttccaacagtgtcagctgctcca
acaccagcaggaaggcgtggtaaaatgagtcgtcatggaaacctagcacaaccagctggt
aacgtagctgttgaaaatgcagttacaatggatgaaaaacctgaccttatgacaatggat
tatgacaaatttgctccacgcaagtctcaggcgtacccggacccacctctgtatctatgc
ttgcgcctcggcaccccacagaacaagaatgtcttccataactactctatagagtcttat
ggcaggagaagaaagaagtcagagtactggttctctattcctagagagaaagttgaccac
ctgtatgcattttttgtgcaatggacgccagaaatatacggtgatgaggaggagataact
cctgaaaaacgaggttttgttgtaatagaggacgacgaaagtgaagaccttgagatgtta
gatgaacactttggtcctaactcaacatttgccaaagattgggagatgattaataaaaga
caaaggataatcagtcaaagtgaggccattaagagacgatctattgtatatgaggagcct
atacccttaccagagcttattggcgagtcaacaatacttaaagagtttcatatcagtgag
ctttgtcaagtaatgcctggaagaactgtaggctacccttggacattgatctacagtaca
gacaaacatggcttctcactgaagacattgtatagagatatggtcgggttagagtcacct
atacttattgctgtcaaagataccaatgacaatatattcggagcattgacgtcctgccag
ttgaagtacagtgacagtttttatggtacgggagaaacattcttgttcacattttaccca
gaattcaaagtgttcaactggactggagagaataacttcttcattaaaggaaaccaagaa
agcctcagcataggagctggacaaggtgtatttgggctatggtttgatgaagacctgtat
catggtagaacaaacaagtgtgaaacgtttgacaatgatttactcacaagttccgaagat
tttgtcgtcaaaggtgtggaggcatgggctttcatttgggactga
DBGET
integrated database retrieval system
