Ruditapes philippinarum (Manila clam): 132720424
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Entry
132720424 CDS
T09557
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rphi00535
]
132720424
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rphi00537
]
132720424
Proteoglycans [BR:
rphi00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
132720424
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rphi00537
]
Others
132720424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
CS_DNAAF11_C
DUF6445
Motif
Other DBs
NCBI-GeneID:
132720424
NCBI-ProteinID:
XP_060560550
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MADSRSSFLTQLCVLIIFMSNLCDIAQSLDLSCIEVKKEYVKLGFRDDSSVPISPISGDH
LQICPHGSTCCTSDMENKLKSLSMKEYEGVADEAFRFIKSTFVSRTKKFDEFFTELLENS
KKDLHEMFVRTYGLLYQQNAEVFSKLFRDLKLYYKGENLNLVDILNDFFTNLLQKMFELL
NAQYVFEKDYLSCVTRHMDDLKPFGDIPQKLKLQVKRAFIALGNFCAVAYGKMVVLPVSK
IKPTEACTRGMTRMMYCQHCGGLTRTKPCNNYCLNTMKGCLAHHSELNKAWNEYIEALKL
VAERLEGPFNIETVVDPIDVKISEAIMNFQEDSTTVTERIFKGCGQPRRNTNSRYKRDES
SYTDYAYGKEFMTYARGGQSNEREATAAGTNLDRLVKDIKDKVEVAKNFWVQLPYSICNG
EIANQPDNDEDCWNGQDRAKYIHEVQKDGRIYQVNNPEVTVDVQEDNGIISVQIYNLKLI
TTKLHNAYHGVDVEWSPSNIDIDASGDDLEGSGSNRRHKVKGDKVVASGDGRDDGDDDDD
VVQSGSGSGQGSDDEDESPGYPTRRPLRPVYPTRRPLRPNQPPDGDIDFQNPNNPKYDIN
KPNKKGEKVGDSGASSVSTSALLIISTIYMVLQVVL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcgcgttcaagtttcctaacacaattgtgtgttcttattatttttatgtca
aatctttgtgatatcgctcaaagtttggatctatcgtgtatagaagtgaagaaagagtac
gttaagctcgggtttcgggatgacagctccgtaccaatttcgccaatatcaggtgaccat
ttacagatatgtccgcatgggagcacgtgctgtacatcagacatggagaataagctcaaa
tccctcagtatgaaggagtatgaaggggtagcagatgaagcatttagatttatcaaatca
acatttgtatctagaacaaaaaaatttgatgagtttttcacagaacttttagagaactcc
aaaaaagacttacatgaaatgtttgttcggacttacggattattatatcagcaaaatgct
gaagtgttttccaaacttttccgtgatttaaaactgtattataagggtgaaaatttaaat
cttgtggacattttaaatgacttcttcacgaaccttctgcaaaaaatgtttgagttattg
aatgcgcagtatgtgttcgaaaaagattacttgagttgtgtgacacggcatatggatgat
ttaaaaccatttggcgatattccacaaaaattgaagcttcaggtgaaaagagcttttatt
gcgctcggaaatttttgcgctgtagcctacggtaagatggtggttttaccagtaagtaag
ataaagccgacggaggcctgtacccgcggtatgacgaggatgatgtattgtcaacattgc
ggcggacttacgaggacgaagccatgtaataattactgtcttaacacgatgaagggttgt
ctagcgcaccactcagaactaaacaaggcatggaacgagtacattgaagcgctgaagttg
gtggcagagcggctagaaggtcctttcaacattgagacagttgttgaccctatagatgtg
aagatatcagaagctatcatgaacttccaagaagacagtactactgttacagaaaggatt
ttcaaagggtgcggtcagccacggagaaacactaacagccgctacaagagggacgagtcc
tcgtatacagactatgcttatggtaaagaatttatgacatatgctcgtggtggtcagagt
aatgaaagggaggcaactgctgcaggcacaaaccttgatcgtcttgttaaagatatcaag
gacaaggttgaggtggcaaagaatttctgggttcagcttccatattctatatgcaatggt
gagatagccaaccagccagataatgatgaggactgttggaatggtcaagatcgagcaaag
tatatacatgaggtacagaaggatggacgtatatatcaagtgaacaatccagaagtgacc
gtggacgtacaagaggacaatggcattatctctgtacaaatttacaacttgaaattgatc
accacaaagctacacaatgcctatcatggtgttgatgttgaatggagtccctctaatatt
gatattgatgcaagtggggatgaccttgagggcagtggaagtaacagaagacataaagtt
aaaggtgacaaagtggttgctagtggagacggtagagatgatggtgatgatgatgatgat
gttgtacaaagtggttctgggtccggacagggatctgatgatgaggatgaatcaccaggg
tacccaacacgtcgacctctacgtcccgtgtacccaacacgtcgacctctacgacctaac
cagccaccagatggcgatattgacttccaaaatccaaataatccaaaatatgacattaac
aagccaaacaagaagggagaaaaagtgggtgattcaggggcatcatccgtatcaacaagt
gctttattaatcatttcaaccatatacatggttctacaagtagttttgtaa
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