Ruditapes philippinarum (Manila clam): 132720689
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Entry
132720689 CDS
T09557
Name
(RefSeq) tumor susceptibility gene 101 protein-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03250
Viral life cycle - HIV-1
rphi03272
Virion - Hepatitis viruses
rphi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132720689
03272 Virion - Hepatitis viruses
132720689
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132720689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132720689
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132720689
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
132720689
Exosome [BR:
rphi04147
]
Exosomal proteins
Proteins found in most exosomes
132720689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
RecJ_OB
Motif
Other DBs
NCBI-GeneID:
132720689
NCBI-ProteinID:
XP_060560855
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MSNYEQFLKSSLNKYKSPDVTKRDVLSVFTTFSDLRPKLDDFVFNDGTRKSLLQLDGTIP
VNYKGAVYNIPICIWIMDTHPYNPPMVFVKPTPTMQIKSGRNVDMNGKIDLPYLREWKYP
NSDLIGMIQILTIVFGEEPPVYSRQQQQAPPIRYPNQTPYPPAGNSSFPMPMPGMGGTSN
TPYPSNTPYPSSNVGYPQTSSYPGQYTGYQPPTTGFQGYPNYSGAPASSGYPGANNPPAY
SQSQATNYQSTSSTASNYSGSGTNTVTEEHLKASLLSAVEDKIKWRLKETFAQAQAEMDV
LYKTQADLLKGKDKLETMIKDLEKEKSEIGANIILLKQKDGEVKETLSRLENQDQINIDD
AVVTTAPLYRQLLKAFAEEQAIEDAIYYLSEALRKDVIDLEVFLKRVRELSRKQFMLRAL
IQKCREKAGLPPLA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactacgagcagtttttaaaatcgtcgctaaacaagtacaaatccccagatgtt
acaaagcgtgatgttcttagtgtcttcaccacattcagtgacttgagaccaaagttagat
gactttgtgtttaatgatggtacaagaaaatccctattacagttagatggaactatacca
gttaattataaaggggcagtgtataatataccaatatgtatatggattatggacactcat
ccatacaatccccctatggtgtttgttaaaccaacacccacaatgcagataaagtcgggc
aggaacgtagatatgaatggaaaaattgatctgccctatcttagagaatggaaatatcca
aattcggacctgattggcatgatacagatattaacaatagtgtttggcgaggaaccccct
gtgtactcaagacaacagcaacaagcgccccctatccgctacccaaaccaaacaccatac
ccaccagctggaaacagttcattcccaatgccaatgcctggaatgggtggaacaagtaac
acaccctatccatcaaataccccgtacccatcctcaaatgttggctacccacaaactagt
agctaccctggacaatatacaggatatcaaccaccaactactggtttccaaggttaccct
aactattcaggagcaccagcttcatctgggtacccaggagcaaacaatccccctgcatat
agtcaatcacaagctacaaattaccaatctacatcttcaacagcatcaaattacagtgga
agtggtactaacacagtgacagaggaacatttaaaagcatcgctgttgtctgcagttgag
gacaaaataaaatggaggctgaaagagacatttgctcaagcacaggctgaaatggatgtt
ttgtataaaacacaggcagacttgctgaagggtaaagataaactggaaacaatgatcaaa
gatttggaaaaagaaaagtcggagataggagcaaatatcatattattgaaacagaaggat
ggtgaagttaaagagacattatctcgcctcgagaaccaagaccagataaatattgatgat
gctgttgttactactgcaccactttatagacaattgttgaaagcatttgcagaagagcag
gccatagaggatgctatatactatctaagtgaagcgttacggaaagatgtgatagatctt
gaagtctttttgaagagagttcgagagttgtcaagaaaacagttcatgttacgagcgttg
atacaaaaatgtcgggagaaggctggattacctcccttggcatga
DBGET
integrated database retrieval system
