KEGG   Ruditapes philippinarum (Manila clam): 132720883
Entry
132720883         CDS       T09557                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03082  ATP-dependent chromatin remodeling
rphi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132720883
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132720883
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rphi01009]
    132720883
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rphi03021]
    132720883
   03036 Chromosome and associated proteins [BR:rphi03036]
    132720883
Protein phosphatases and associated proteins [BR:rphi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132720883
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     132720883
    SWI/SNF complex
     132720883
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    132720883
   PBAF complex
    132720883
   SWI/SNF complex
    132720883
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 132720883
NCBI-ProteinID: XP_060561096
LinkDB
Position
Unknown
AA seq 384 aa
MASGGRLKTFGDKPKSFALEENGESYYIGSEVGNYLRMFRGSLYKRFPSMWRRLITVDER
KKLAQIAGFGQQSLATNISLLRATEVDEIIEGGGDKYKEALGFSSEPIIRRGESKQKRST
WVPTVPSTSHHLDAVPCSTPINRNRLGKPKVRTFPTCYDDSDPSQNHENANQLENLVPIR
LDMEYEGQKLRDCFTWNKNETLISPEMFAEILCDDLDLNPVNFVPAIAQVIRSQLEQYQN
EQPEPVEETPFDQRVILKLNIHVGNISLMDQFEWDISEPENSPEQFATKLCAELGLGGEF
VTAIAYSIRGQISWHQKTYAFSLHTDCSETPLPLVEVAIRNQNESDNWCPFLEILTDQEM
EKKIRDQDRNTRRMRRLANTAPSW
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggcgtcgggtggaagattgaaaactttcggcgataaaccgaagtcattcgcacttgaa
gaaaatggagaatcgtattacattggttctgaagttggcaactacctgcgcatgtttaga
ggctctctgtacaagaggttcccatccatgtggagacgtctaatcacagtagatgaacga
aagaaattggcacaaattgctggctttggacaacagtcattagctacaaacatttcatta
ctgagagccacagaggttgatgaaatcatcgagggaggtggcgacaagtataaggaagcg
cttggtttttcatctgaacccatcattagaagaggtgaatctaagcagaagcgttccaca
tgggtaccaacggttcccagcacttcacatcatctggatgcagtaccatgttctacacct
ataaatagaaacagattgggaaaacccaaagtgagaaccttcccaacatgttacgatgac
tcagatccgtcacagaatcacgagaatgccaaccagctggagaacctcgtacctatcaga
ctggacatggagtacgagggacagaaactcagagactgttttacatggaataaaaatgaa
accttgatctcaccagaaatgtttgccgagattttatgcgatgaccttgaccttaatcct
gtaaactttgtaccagcaatagcacaggtcatcaggtcacaactagaacagtatcagaat
gaacagccagagcctgtggaagaaacgccttttgatcaacgggtcattttaaagttgaat
attcatgttggcaatatatcactgatggaccagtttgaatgggacatatcagagccagag
aacagccctgaacaatttgctactaaactgtgtgcagaattaggtttaggtggagagttt
gtgaccgccatagcttacagtatccgaggacaaatcagctggcatcagaaaacatatgca
tttagtttgcatactgattgcagtgaaacacccctgcctcttgttgaagtggccatcaga
aaccagaatgagtccgacaactggtgccctttccttgagattcttacagatcaggaaatg
gagaagaagattcgagatcaagacagaaataccagacgtatgagacgattagcaaataca
gcaccttcatggtga

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