Ruditapes philippinarum (Manila clam): 132720921
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Entry
132720921 CDS
T09557
Name
(RefSeq) serum response factor-like
KO
K04378
serum response factor
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132720921
Transcription factors [BR:
rphi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
132720921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
132720921
NCBI-ProteinID:
XP_060561147
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MDSSSPDLKVLSAPQMYNMDLLNGGHLGNQPAFPGQAYGAGNKGITLEQVDPSTFEDDSD
DDEFGTGKGLRPGKKTKGRVKIKMEFIENKLRRYTTFSKRKTGIMKKAYELSTLTGTQVM
LLVASETGHVYTFATRKLQPMITSESGKALIQTCLNSPDPPPIAPGQQQAVEQRMNPGGF
EETELTYAVEEENGKPIMMDGSGGLKPVYTMNNSPTIQENYSQSPVSQAVVQQTQIQPQT
QTYQTTSTVPMATIVQQPIYQTSSSPQPSTTKSSTPGSISVHLPGLPPGFILQPGTQFVI
PGQQGTSVATSQQQVQQQHVYRIATNAQGTQVLQTENGQRLQTNGTSTAGATTVNVLNTA
TQQAAPALTPSVFMYHTPQGIVYAPAPSSIQDKTIFNFQQPATALSDTGQSAAGQVQQQT
QGQQQQQIITIPMPVSLAGSPQVLQLATTDSTQLSDLSQPSAAKKSRKT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggactcttcatctccagatttaaaggttttatcagctcctcaaatgtacaacatggat
ttattaaatggcggacatctaggcaatcagccagcttttcctggacaggcttacggtgcg
ggaaataagggcatcacgttggagcaagtggatccgtcaacatttgaagatgattccgac
gatgacgaatttggcacgggcaaagggctgcggcccgggaaaaagacgaaaggacgagtt
aaaattaaaatggaatttattgaaaataaactccgaagatatacaacatttagtaaacgg
aaaactgggataatgaaaaaggcttatgagctgtcaacacttactggtactcaagtcatg
ctcttagtcgcaagtgagactgggcatgtgtacacttttgctacccgtaaacttcaaccc
atgataactagtgaaagtggtaaggccctgattcagacctgtctcaactccccggaccca
ccacccatagccccagggcagcaacaggctgtggaacagaggatgaaccctggtggattt
gaggagaccgagctcacatatgctgtagaggaagaaaatgggaagccaattatgatggat
gggtctggaggtcttaagccagtgtatacaatgaacaatagtccaacaatacaagagaat
tacagtcagtcaccagtatcacaggctgttgtacaacagacacagattcagccacagact
caaacatatcaaaccacatccacagtgcctatggcaacaattgttcaacagcctatttat
caaacatcgagcagcccacagcctagtacaacgaaatcatcaacacctggcagtatttca
gtacatctccccggacttccaccaggatttatcctacagcctggaacacagtttgtgata
ccaggacagcagggaacatcagtcgcaacatcacaacaacaggtccaacaacagcatgtt
tacagaatagccacaaatgcacaagggacacaagtgttacagacagaaaatggacagaga
ttacaaacaaatggtacaagtacagcgggggctaccactgtgaatgttcttaatacagct
actcagcaggctgccccagcccttacaccaagtgtgtttatgtaccatacaccacagggc
atagtgtatgccccagccccgtcatccatacaagataaaaccatcttcaactttcaacag
ccggccactgcattgtcagatactggtcagtcagcagctgggcaggtacaacaacaaaca
caaggacaacaacaacaacagattatcaccatccccatgcctgtctcattagctggatct
cctcaagtgttacagttggcaacaacagactccacacagttgtcggacctatcacaacct
agtgctgctaaaaagtcgagaaagacttga
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