Ruditapes philippinarum (Manila clam): 132721281
Help
Entry
132721281 CDS
T09557
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132721281
Transcription factors [BR:
rphi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132721281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132721281
NCBI-ProteinID:
XP_060561544
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MSTEMSLKGQAPPQTQLPASHHPGMNGPSPGLNNNEDHISEHHQSPNGQNGSQGAGGPGA
KNAQAANDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI
DEAKRLRAIHMKVIAEHPDYKYRPRRKTKTLMKKDKYALPGMPPGAGGMGMGQVGRDATG
MYMNGYMPNGYPMMTDPNAYQQMQHMGAFQGGYGQYLPAQSMQVGQGTTSASYMNGGSSY
TMSMAPYGMPPQSHVIKRESNTPQGHSSVGAPQGVSGRPNGVAPGDLREMISMYLPPGSD
PNDPSAQQRLQQQMQAMGHYPVPSSESMNSNTVPLTHM
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggagatgtccctgaaggggcaggctccgccacagacacagctaccagccagt
caccacccgggtatgaacggcccgtccccagggctcaataataatgaagatcatatctct
gaacaccatcagtcaccaaatggacaaaatggctcccagggtgctggtggccccggggct
aaaaacgcacaggcagcaaatgacagagttaaacgcccaatgaatgcatttatggtgtgg
tcaaggggacagcggcgaaagatggctcaagaaaatccaaagatgcacaattctgaaatt
agcaaaagacttggcgcagaatggaaacttctgtccgagacggaaaaacgccctttcata
gatgaggcgaagcgactgcgggcaattcacatgaaggtaattgcggaacaccccgattac
aagtaccgtccacgacgaaaaactaaaacgttaatgaagaaggataaatatgccttgccg
ggtatgcccccgggggctggaggaatgggtatgggacaggtgggaagagacgcaacagga
atgtacatgaatggatacatgccaaacggatacccgatgatgactgatccaaatgcctat
caacaaatgcagcacatgggcgcgttccagggaggttatggacaatatttacctgctcaa
agcatgcaggtaggacagggtacaacctccgcctcttatatgaatggtggctcaagttat
acaatgtcaatggctccttatggcatgccaccccagtctcatgttataaaacgtgaatcg
aacacaccccaaggacactcaagtgtgggcgcaccacaaggcgtctcagggcgacctaat
ggtgtagcccctggggacttacgtgaaatgatcagtatgtatttacccccgggctcagac
cccaatgacccaagtgctcaacaaagactacagcaacaaatgcaggcaatgggacattat
ccagtaccgtccagtgaatccatgaactcaaacaccgtaccgctaactcatatgtaa
DBGET
integrated database retrieval system
