Ruditapes philippinarum (Manila clam): 132721374
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Entry
132721374 CDS
T09557
Name
(RefSeq) CAP-Gly domain-containing linker protein 1-like
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
132721374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132721374
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rphi04812
]
132721374
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
132721374
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
132721374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1
CCDC39
CLIP1_ZNF
Rod_CreS
CEP135_TSGA10_CC
FKBP15
ERM_helical
Motif
Other DBs
NCBI-GeneID:
132721374
NCBI-ProteinID:
XP_060561649
LinkDB
All DBs
Position
Unknown
AA seq
1578 aa
AA seq
DB search
MSLPRPSGLKAPSGSKLAKPSGGIPQKSGLMQPGSLSRAQSAIAKSARAAGLNTSVAEKY
AADAAQTLAGEEDLGAPPPPVDDFIIGDRVFVSGSKPGFIAFLGETQFAPGDWAGVVLDE
TIGKNDGSVNGVRYFQCEPKRGVFCRISKLSRTPGIAGAVKSAEDGSTSEVAMPVNGDNT
PVNKRPTTPSMSHRPTTPSHGESRLMRPTTPSLPRPVNKSLSSSNTSLNRGHAPAKVKSE
MTSGSAGIKHNLNIGDRVLVSGSKQGTLRYLGPADFAKGEWAGVELDDPVGKNDGAVAGK
RYFDCRPRYGLFAPVHKVTKTSVTSTPNSMSRSVGSAGMRLSRERSGSQESVSSMSSATS
SASRPRVRLGVSGLGNNQPTPGARSGQRPSSLNITATTSALQKALKEKEEHIEQLLRERD
LERSEVARAAAQVEEAQDQLTQLRAETDRLQEGSEESIQQLKAKIQKLASEKHDLAEKLD
DEKRKVEDLQFQIEEEVISKDDLESRTEEEEAKIRELEKSLKREKDKNEKIETELITYKV
CLEQNMKTVEVPEETRLYLDPIESHHKLTQAELKIQTYDSSRLEEGAKTSQVSLELEEKT
NKVSELEDFLSMKTKEVKQLQDKLSEMKDELESRSNKLEKLQNNFGELTEKLKSNEVFSN
NLSLEVQNLKSQNSDLERKLKDNQERCQQLNDEKAHLESQVADMMKNTGDSSNQLSMLNE
QLGQKNRKLEELQADLSTSTQKWHNLNNKFETSMREKEREIEKLAAKNDEIKSTLTSNLE
DVQKELDKTKTKIVNMEKDHESEKESILKRKENEITELKQQMEVSAENLSKQEIQTQAHK
QVLDQITMEKEAVQFEKEKVEKQVKRLEAERDTLNSELIQLKVEATKSQSSVDQVSQERA
KAEEKIQDITEEKERVEKLLAEVQKSKDDVISEKEKISTEKDQFERETIEGRAALQQKDM
LVEELQKEVEKLKQDSSQQQETINQLSQATEDSGAMQKKLAEQMSLVETWKKKVTDLEAA
SSEAKKKSEEQGSEIKSMKIELEESQETVTLLEENVKDLEKEKDILTSQLQGSLEARKEQ
DKVLELNKKLNEEIETIHERHRTEVQMLKATKDSLQEEVDNTTSLFDQQEEELKAKILQI
SNLENENSTLMGYKSTNEKLEQETTELRGKINLLQSKLTEAQSNTNNMNNIDTTTGNNID
STTGNTGGNSALIEQLKEENITAQGQVEFLNSVIVDLQHKCDELKTRLEAMELGVTNGAD
DSLETATPTKRAAPRVFCDICDVFDRHETEDCPLQEMSDSPPPSQYHGERHQVRPYCDIC
EEFHPPCPGLSVQKVAASGAEPIDPKAKVEDWVKTVDTVTSELVSESEKVFGNDGEFFHV
HQDIQDVPGFRDSGYYDGIVDSNLKSPFDVKPGMFSSITELSDKDKAKLWDKLKKEATKC
EQYINEEYKAANKDLLITNETKTKGLTMKTDVVDDGKERPNSLETGHGLTDTSTNKASIV
KTPVGLTSPVSLTSVSDSEYQSGKESLDSDSPVDSGTPDMETSVDTGEVFKPENDDKNAP
EKEDKSESDQAAENCTIS
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccaagaccttccgggctaaaggccccttcagggtccaaattagcaaaacca
agtggaggtatcccacagaagtcagggttaatgcaacctggctcattgtccagggcacaa
agtgctattgccaaaagtgcaagagctgcaggtttgaacaccagcgtggctgagaaatat
gctgctgatgccgcacagactctggcaggtgaagaagatttaggagcgccaccaccacca
gtggatgattttataatcggggatcgtgtgtttgttagtggttctaaacctggatttatt
gcttttctcggagagacccaatttgctccaggggattgggcaggagttgtgcttgatgaa
acaatcggtaaaaacgatgggtcagtgaatggagtaagatattttcaatgtgaacccaaa
cgtggtgtgttctgtagaatttctaaattaagtcggactcctggaatagcaggagctgtt
aagtcagcagaggatggatcaacatcagaagtagcgatgccagtaaatggtgataataca
cctgtgaataaaagacctactaccccgagtatgtcacaccgcccgacaaccccaagtcac
ggggaaagccgtctgatgcggccaacaactccaagtttaccgagacctgtaaataaatct
ctttcaagctcaaacactagtttgaatcgaggtcatgccccagctaaagtgaaatctgag
atgacctctggttcagcgggtataaaacataacttgaatattggtgatagggtattagta
agtgggtcaaaacaaggaaccttacgttacctaggtccggcagactttgcaaagggagaa
tgggcaggtgtagaattagatgatccagtagggaagaatgatggagctgttgcagggaaa
aggtattttgactgccgtcctcgatatgggctatttgcgccagtacacaaagtcacaaag
acgtctgtgacttcaacaccaaactcgatgtcaaggtcagtgggaagcgctggtatgagg
ttgagtagggagcgcagtgggagccaggaatcggtgagctcgatgagttcggcaacatcg
agtgcatcaagaccgagggtaaggctcggagtgtcaggcctcggaaataaccagccgaca
cctggggcacgttcgggccaacgacctagctctctcaatatcactgctaccacatctgca
ctccagaaagctttgaaagagaaagaagagcatatagagcagttgctaagggaacgtgac
cttgagaggtcggaggttgctagggccgcagctcaggtagaagaagctcaagatcagctg
acacagttgcgagcagagacggacagactacaggaaggtagtgaggagagtatacaacaa
ctgaaagctaaaattcagaagttagcgagtgaaaaacatgaccttgcagaaaaactagat
gatgaaaaaaggaaagtagaagatttacaattccagatagaagaggaggtgattagtaaa
gatgacttagagagtagaacagaagaggaagaagcaaagattcgagaattggaaaaatcc
ttgaagagggagaaagacaagaatgaaaaaatagaaactgaacttataacatacaaggta
tgtttagaacaaaacatgaaaacagttgaagtcccggaggagaccagactgtacctggac
ccgatagaaagccaccacaagcttacccaggctgagcttaaaatacaaacctatgattca
tctagactagaagaaggtgctaagacaagccaggtcagcttggagttggaggagaagaca
aataaagtgtcagaacttgaagattttctctctatgaagactaaagaagtaaaacaacta
caggacaaactctcagagatgaaagatgaattggaatcaagaagcaataagcttgaaaag
ctacaaaataattttggagaattgacagagaagttgaagtctaatgaagtgtttagcaat
aatctttcattagaggtgcaaaatctcaagtcacaaaactctgacttggagagaaagctt
aaagacaatcaggagagatgtcaacaactaaatgatgaaaaagctcatcttgagagccag
gttgctgacatgatgaaaaatactggtgacagttcaaatcaattgtcaatgctaaatgaa
cagcttggacagaagaatagaaagctcgaggaactacaagccgacttgtcgacttctact
caaaaatggcacaacctaaacaataaatttgaaacaagtatgagggaaaaagagagagaa
atagaaaaattggcagctaaaaatgatgaaattaaatcaaccttgactagtaatcttgaa
gatgtgcaaaaagaacttgataaaactaagacaaaaatcgttaacatggaaaaagaccat
gaaagtgaaaaggaatctatattaaaaagaaaagaaaatgaaattactgaacttaaacaa
caaatggaagtgtcagcagaaaatctcagtaaacaggaaatacagacccaggctcataaa
caggtgcttgaccaaatcaccatggagaaagaggcagtacagtttgagaaagagaaggtg
gaaaaacaggtaaagagattagaggccgagcgggatacattaaacagcgagttaattcaa
cttaaagtggaagcaacaaaatcacagtctagtgtagaccaagtgtcacaagagagggct
aaagctgaagaaaaaatacaagacatcacagaggagaaggagagagtggagaaactgctt
gcagaggtacagaagagtaaggatgatgttatatcagagaaagagaagatctcaacagag
aaagatcagtttgagagagaaactatagaaggcagggcagctctacaacagaaagacatg
ctggttgaagagttacaaaaggaggtagaaaaactgaaacaggactctagtcaacaacag
gagacaatcaaccagttgtcccaggcaacggaagattcaggtgcaatgcagaagaaattg
gcagaacagatgtcactggtagagacatggaagaagaaggtaacagaccttgaggcagca
tctagtgaggcaaaaaagaaatcagaagaacaaggcagtgaaataaaatctatgaagatt
gaactagaggaatctcaggagactgtaaccttacttgaagagaacgtaaaagacttggag
aaagagaaagatattctaacatcacagctacaaggttctttagaagcaaggaaagagcaa
gataaggtgctggagttgaacaagaaattaaatgaggaaattgaaactatacatgaaaga
cacaggactgaggttcaaatgttgaaggcaacaaaggacagtcttcaagaagaggtggac
aacactacatcattgtttgaccaacaagaggaggaacttaaagctaaaatattacagatc
tcaaatttagaaaatgagaacagtactctgatgggatacaaatcaaccaatgaaaagtta
gaacaggaaacaacagaattacgaggaaaaatcaacctgttacagagcaagttaacagaa
gcccagtccaatacaaacaatatgaataatattgacacaaccactggaaataatatagat
tctaccactggaaacactgggggaaatagtgctcttatagaacagttgaaggaagaaaat
atcactgcacaaggacaggttgaatttttgaactcagttatagtagatctccagcataag
tgtgatgagttaaagacaagacttgaagctatggagcttggtgtaaccaatggtgctgat
gactcactagaaactgcaacacctacaaaacgtgcagcaccacgtgtgttttgtgatatc
tgtgatgtgtttgaccgtcacgagacggaggattgtcctctacaggagatgtctgacagc
ccgccaccctcacaataccacggtgagagacatcaggtccgcccatactgtgatatatgt
gaagagttccacccgccatgccctggtctttctgtacagaaagtcgctgcctctggtgcc
gagcccattgatcctaaagccaaagttgaagactgggtgaaaactgtagacacagtcact
tcagaattggtcagtgagtcagaaaaggtattcggcaatgacggcgagtttttccacgta
catcaagacatacaagatgttcctggatttagagacagcggatattatgatggtatagta
gactcaaacttgaaatctccatttgatgtcaagcctggtatgttttcctctatcactgaa
ttgtctgacaaagacaaagcaaagctttgggataaattaaagaaagaagcaaccaaatgt
gaacagtacatcaatgaggagtataaggctgctaataaagacttgctaattacaaatgaa
actaaaactaaaggtttaacaatgaagacggatgttgtcgatgatggcaaagagagacca
aattcactggaaactggacacggacttactgatacttccaccaacaaggcgtccattgtt
aagacacctgttggtttgacgtcacccgttagtttgacgtcggtgtcagacagcgaatat
caatccggaaaggaaagtctcgattctgattcccctgtcgattcaggtacacctgatatg
gaaacctcggtcgatactggtgaagtctttaaaccggaaaacgacgacaaaaatgctcca
gaaaaagaagataaatctgaatcggatcaagctgcggaaaattgcactatctcttga
DBGET
integrated database retrieval system
