Ruditapes philippinarum (Manila clam): 132721438
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Entry
132721438 CDS
T09557
Name
(RefSeq) glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132721438
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132721438
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132721438
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132721438
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
132721438
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132721438
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132721438
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132721438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
YlaC
DUF5331
DUF4952
Motif
Other DBs
NCBI-GeneID:
132721438
NCBI-ProteinID:
XP_060561728
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MQVVIKQLCRRITQSCIVTEHLYRSISSTVSLSRQCLGGDPRSRNIFVLKEIDVMDPKIE
EQLAPFRQAVKEQGDIVRQLKADKAPDIDLQRAVAELKTRKHALEHKEIELTPKDNFDRS
KMEDLLKQKFFYDQSFAIYGGVNGLYDFGPMGCAVKANLLQAWRNFFVLEENLLEVDTAM
LTPEVVLKASGHVERFQDYMVKDVKNGECFRADHLIENSFEKMLTDKKVTAEVKEQIRKI
LPTIDNMDKDEMGKTLKQFNIKSPVTGNDISDPMEFNLMFATSIGPTGTLKGYLRPETAQ
GIFVNFKRLLEFNGGKLPFGGAQIGSAFRNEISPRSGLIRVREFTMAEIEYFVDPQEKKK
FFKFDSVKDIKLTLFSACNQMDGKGPEAKSLKDAVADGTIANETLAYFMARINLFLIKIG
VDETKLRFRQHLSNEMAHYACDCWDAELKTSYGWIECVGCADRSCYDLMCHQKATGLKLV
AERKLDKPKTIEVVECKVNKGVMGKVFKKDAKVVTDFITRMEDNELDAMDKILKEKGEFE
IKPNDQSFVVKSDMVTVNKFSKTVHVEDFNPSVIEPSFGIGRVMYALFEHNFRMREGDEQ
RTYLSLPPIIAPYKCSVLPLSNNAQLMPFVNQLAKDLLKCDISHKVDSSTGSIGRRYART
DAIAIPYGITVDFDTIKEPHSATLRERESMKQIRAPISELAQIVYDLANHRRTWDDILNN
YPIFEQQESTK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttgtgatcaaacagctgtgcaggcgaattacacaatcttgcattgtcacagaa
catttgtatagatccatttcttctactgtctccttatcaagacagtgtctgggtggggat
ccaagaagcagaaacatttttgtattgaaggaaatagacgttatggatccaaaaattgaa
gaacagcttgctccctttagacaagctgtgaaggaacagggtgacattgttcgtcagctg
aaggcagataaggcccctgatattgatctacagagagctgttgctgagctgaaaacgaga
aaacatgccttggaacataaggagattgagttgacaccaaaggacaactttgacagaagc
aagatggaggatctacttaaacagaaatttttctacgaccagtcatttgctatttatgga
ggtgtgaatggactgtatgattttggtcctatgggttgtgctgtgaaggctaacctgcta
caggcatggagaaacttctttgtgttggaggagaatttactggaggtggacacagccatg
cttactcctgaggttgtgttaaaggcatctggtcatgttgaaaggttccaggactatatg
gtgaaagatgtcaagaatggagaatgtttcagggcagaccatctcattgaaaattcattt
gaaaagatgttaactgataaaaaagtgacagcggaagtaaaagaacaaatccggaaaata
ttgccaacaatagacaacatggataaagatgaaatgggtaaaacgttaaaacagttcaat
atcaaatcacctgtgactggcaacgatatatcggacccaatggaatttaatctcatgttt
gcaacatccatcggacccacagggacactgaaaggttatttgagaccagaaacagctcag
ggtatatttgtcaactttaagaggttattggagtttaatggtggtaaacttcccttcggt
ggagcacaaattggcagtgccttcagaaatgaaatttcaccaagatctggcttaataaga
gtgagagaattcaccatggctgaaatagaatactttgtagacccacaagagaaaaagaaa
ttcttcaaatttgattcagtgaaggatatcaaattgacgctgttctctgcctgtaatcag
atggatggtaaaggtccggaggccaaatctctcaaggatgccgttgctgacggtactata
gccaacgagactttagcatattttatggcacgtattaacttgttcctcatcaagattggc
gtggacgagacaaagttacgattcaggcagcatctgtccaatgagatggctcactatgct
tgtgactgctgggatgctgaattgaagacatcctatggttggatcgagtgtgttggatgt
gcagatagatcttgttatgatttaatgtgtcaccaaaaagccactggtctaaaacttgta
gctgagagaaagttagacaaacccaaaacaatagaagtagtggaatgtaaagtgaacaaa
ggtgtgatgggcaaagtgtttaagaaagatgcaaaggttgttacagacttcataactaga
atggaagacaatgagcttgatgccatggacaaaatactcaaggagaaaggagaatttgaa
atcaaaccaaatgaccaatcgtttgttgtgaaatcagatatggttacagtcaataaattt
tcaaaaacagttcatgttgaagattttaacccatctgtgatagagccgtcgtttggtata
ggcagagttatgtatgccttgtttgaacataactttagaatgagagaaggggatgagcag
agaacgtatttatcactgccgccaataattgcgccctacaagtgttcagtcctgccattg
agtaacaacgcacagttaatgccctttgttaaccaacttgctaaggatctgctgaaatgt
gatatatcgcacaaggttgacagcagcaccggttcgataggtcgtaggtacgcccgcacc
gatgccattgccataccgtacggtatcacagtggattttgataccataaaggaacctcac
tctgcgacacttagagagcgagagtcaatgaagcaaattagggcaccgatctcagagctt
gcacagattgtgtacgatttagccaatcacaggcgtacctgggatgacattctcaacaat
tacccaatctttgaacaacaagaatcgaccaaataa
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