Ruditapes philippinarum (Manila clam): 132721542 Help Entry 132721542         CDS       T09557                                  Name (RefSeq) DNA repair protein RAD50-like   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi03440   Homologous recombination rphi03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     132721542    03450 Non-homologous end-joining     132721542  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rphi03032]     132721542    03400 DNA repair and recombination proteins [BR:rphi03400]     132721542 DNA replication proteins [BR:rphi03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     132721542 DNA repair and recombination proteins [BR:rphi03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      132721542     BRCA1-C complex      132721542    NHEJ (non-homologous end-joining)     MRX complex      132721542 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 SMC_N AAA_15 SbcC_Walker_B AAA_21 Rad50_zn_hook ABC_tran AAA_29 AAA_16 AAA_13 AAA AAA_22 AAA_19 DUF6074 Motif Other DBs NCBI-GeneID:  132721542 NCBI-ProteinID:  XP_060561846 LinkDB All DBs Position Unknown AA seq 1204 aa AA seqDB search MSTIEEMKIQGIRSFSPEEKQTIHFNKPLTLILGPNGTGKTTIIECLKYMTTGVMPPGAT KGGAFIHDPKIAHESEVRGQVRLQLRDISQKLVIVQRSLTATQKAKKVEMRTLDNFITWL DAAGEKQSMNPKCADLDRQMITSLGVSKPVLENVIFCHQEEANWPLSEGKQLKEKFDAIF ASTRYVKALDSIKKTKKDQDDKIKMYRSDIQYLIQHKEKAHQLECDLAEQEDKLKVSKKS VNEVNSQLKPRKDKMKKIDEQYAEILGIQKEITQYGIEKKQIEKQVGELQNQIENKFQGT DDELKSMLSDFEDKLKERERTLEEFEDRQKMLSKQSEKLDKEKSAILVEVGRLQQEAERQ EENVSKRDALIKQFADEYSFKDLSGALTDEKYKLFLKSMQRKLEAMVEETRQTKTDFEER EEEIQQKIDELRDKKTKLEQNDKIKREMMSSAQAELDILKKDKASKEENIRILNIFYSNQ NEDVKKCSGKMNQIKNTMSKMETERKMGMEQLKKKEAELKGLEERVYNVCGSQNFDEGLS TIQERMEKVRDQHGSLVGEQHFYMKYAKDLEKDDPCCPLCHRGFDTQQDVRELVLELKDQ LRMVPSKLKTAEKEIDECQEKYDALMQLKPLRENMEKLEKLEIPDLKSSLKKTEDEIHKQ KEDLTKIEEELKIKEDDEAMAKQIQPDIVMMDRYFGDVSELDKKIAMQAAKLSGGDSGRT VQMVIDEKEDLQDKVDSSTKSLDHKRQKLADHSEQIQLEEDKGNLESENTMHEHDIKDTA EKLRLIQVSLCLSHVSFCYTPTTYNSKLDRFGTEKEDLIKKKEEKLETAKAAVEIVKGHA SKVENINQDIESYNQSGKASKLEENQADKERKEKKMVTIEEELKDIVTNIDKWRKDLSTQ KVQELDLQNNLNLRNKQKEIEKISKKIVDLESKLKDLDVAELDRERRCLHQEKENLKKTV SYSIQRYTTEGRQTELENQIRAVKEELQTDMYKGAEEKYRNKIIDLTTTELANEDLEKYE HALDKAIMKYHKMKMSEINKIIRDLWRQTYRGQDIETIEIRSDEDDSTAINTRKTYNYRV VMIKPGDAVIDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESL ADALVEIIKGRIHQRNFQLVIITHNEGFVELLGRSEYVDYFYKVSKDQNGYSRLTKAEVA ELSS NT seq 3615 nt NT seq  +upstreamnt  +downstreamnt atgtcaaccattgaggagatgaagatccaagggatccggagcttcagtcctgaggaaaaa caaactattcatttcaacaagcctcttacattgatattggggcccaatgggacagggaaa actactattattgagtgtttgaagtatatgactacaggtgtcatgccaccaggcgccaca aaaggaggagcatttatacatgatcccaagattgctcatgagagtgaggtcagaggtcaa gtgaggttacagttgcgtgacatatcacaaaaactagttattgtacagaggtcattaaca gctacacaaaaggcaaagaaggtagaaatgaggacattggataattttataacttggttg gatgctgctggtgaaaaacagagtatgaaccctaaatgtgctgatcttgacagacagatg attacctcccttggcgtgtcaaagccagttctagagaatgtgatattttgtcaccaggag gaggctaactggccattaagtgaaggcaagcagttgaaggaaaagtttgatgcaatattt gcttcaacaagatatgtgaaagctctagacagcattaagaaaactaagaaagatcaggat gataagataaagatgtacagaagtgatattcagtatttgatacaacataaagaaaaggct caccagcttgagtgtgatttagcagaacaagaagataaactaaaggtttccaaaaaatca gtgaacgaagtaaacagtcagctgaaacccaggaaggataagatgaaaaaaatagatgaa cagtatgccgaaatacttggaatccagaaggagatcacacagtatggcattgagaaaaaa cagattgagaaacaagtgggggaactacagaaccagatagaaaataaattccaaggaact gatgacgagttgaagagtatgctgtcagattttgaagataaattgaaggaaagagagaga accttagaggagtttgaagacaggcagaaaatgttaagtaaacaatcagaaaagttagac aaggagaagtctgctatactggtagaagtaggaagacttcaacaagaggctgagagacaa gaagaaaacgtttcaaaaagagatgctctgatcaagcagtttgcagatgaatacagtttt aaagatttgtcaggggccttaactgatgagaaatacaaattgttcttaaagagtatgcaa cgtaaacttgaggctatggtagaagaaactagacagacaaagacagattttgaggagaga gaggaagagatacaacagaagattgatgaactaagagacaagaagactaaacttgaacaa aatgataaaatcaagagggaaatgatgtctagtgcccaggctgaacttgacattctgaag aaagataaagcttccaaagaggaaaatattagaatattaaatattttttacagcaatcaa aatgaggatgtaaagaaatgttcaggtaagatgaaccagataaaaaatacaatgtcaaag atggagacagagagaaaaatgggcatggaacaactgaaaaagaaggaggcagaacttaaa ggacttgaagaaagggtatacaatgtgtgtggaagtcagaattttgatgaaggactctca accattcaggaaagaatggagaaagtcagagatcaacatgggtcattagttggtgaacaa catttctacatgaaatatgcgaaggatttagagaaagatgatccatgttgtccattatgt cacagaggctttgatacacaacaagatgttcgtgaacttgtgctagagttaaaggatcag ttaaggatggtacccagcaagttaaagacagctgaaaaagagattgatgaatgtcaagag aaatatgatgctctgatgcagcttaaacctctccgagaaaatatggagaaactagaaaag ttagagataccagacctgaagtcaagtttaaagaagacagaagatgagatacataaacag aaagaggaccttaccaaaatagaggaagaattgaagataaaagaagatgatgaagctatg gctaaacaaatacaaccagatattgttatgatggacagatactttggtgacgtatcggaa ctagacaagaaaattgctatgcaagcagctaaactttcagggggagattctgggaggact gttcagatggtcattgatgagaaggaggatttgcaggacaaagtagattcatctacaaag agtttggatcataagcgtcagaagttggctgaccactctgaacagatacaactggaagaa gataaaggaaatctagagtcagagaatactatgcatgaacacgatataaaggatacagca gaaaagttgagactcatacaagtaagtttgtgtctgtctcatgtaagtttttgttatacc cctaccacatacaatagtaaattggacagattcggaacggaaaaagaagatttgataaaa aagaaagaggaaaagctagaaactgcaaaagcagcggttgaaatagtgaagggccatgct agtaaagtggaaaatattaaccaggatattgaaagttataaccagtctgggaaagcgagc aaattagaagagaaccaggctgacaaggagagaaaagagaaaaaaatggtcaccattgaa gaagagctgaaagatattgttaccaatattgacaaatggagaaaagatctttctacccaa aaggtacaagaacttgatcttcagaataatctgaatttgagaaataaacagaaagagata gaaaagatcagtaaaaagattgttgacctggagagtaaacttaaagatttagatgtggct gaactagacagggaacggagatgtctacaccaagaaaaggaaaatctaaaaaaaacagtt tcttattcaatccagcggtataccacggaaggccgtcagacagaattggagaatcagatt agagctgtgaaggaggagttacaaacagacatgtataaaggagcggaggagaaatatcgt aacaagataattgaccttacaacaacagaactggccaatgaagatttagagaaatatgaa catgcactagataaggctatcatgaaataccacaaaatgaagatgtcagagataaacaaa attatccgagacctgtggagacagacatacaggggtcaagacatagaaactatagagata cgttcagatgaggatgattccacggccataaatacacgtaagacgtataactatcgtgtt gtgatgatcaaacctggggatgctgtgatagacatgagggggagatgtagtgctggacaa aaggtactggcatcgttgataatacgcctggccctggcagagacattctgtttaaactgc ggaattttagcactagatgaacccacaaccaatctggatagagaaaatattgaaagttta gctgatgcactagtggagatcattaaaggacgtattcaccaaagaaactttcagctggta atcattacccacaatgaaggttttgttgagttactgggtagatcagaatatgtagactat ttctacaaagtcagtaaagatcaaaatggttattcaaggctgaccaaagctgaggttgca gaactgagcagctaa

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