Ruditapes philippinarum (Manila clam): 132721571
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Entry
132721571 CDS
T09557
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132721571
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
132721571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
TSP_1
CILP
CILP_5th
Ig_3
Ig_2
TSP1_spondin
I-set
TSP1_ADAMTS
ig
V-set
Ig_C17orf99
TSP1_CFP_C
FAM171A1-2-B_N
New_glue
BppU_IgG
Motif
Other DBs
NCBI-GeneID:
132721571
NCBI-ProteinID:
XP_060561874
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MNANEKYQANFRSLTPSSLEKERSFTNISRAPEDGTAEVKPAASPNLKNVVVALIVVVVI
AVGCIAALVVVLTTKDDGEGDHTTVPPRTTTTDHMTTTISIPTNHQTTSIASTSSQTTTG
TIDGIWSTWGDWTKCTSTCDSGIHKRYRRCEGQDSNQCLGDFTETEVCVEMSCPEYGKWT
TWGPWESCGVSCGGGFQSRTRSCSKAESSDIDCIGTSFQEKTCNEWKCPVSSKMLDCSRV
CDVGVLDDDCDICFCDGEVVSGRVLAVDTSNPVSNAVFYWSSSPTKNLGESSSTGLFTLE
NMCPESELIVSRPGFVDAAVLVTTSYLLVNMSKTVSPYLTKTPQSKNRLVGEDVTLCCDA
VASPPINYYEWMKDGLIIEETLYAEGNQLKLFSLSTTDSGSYKCRANTNAGAIMSPTATL
NVKEISNDFCIDALQQKTIALPDDCVQPRTNTATYNVGECISKGCRENTTSESNVCHEDI
TSCCTIGDADLEKVQCSDYELDVIVIRSCSCGACASTSLTVFGTALGLEDGSPLRYGEVF
VNGVYKTFTSNTGTFSFVATKDSPRITLNLRDVYLKQFLPAVKVIEINDKMNGNLRVKIN
MIRTVKPIEIESTTENTLIAGASASKPIVQVSIPANAFYYQNGTKFEGTVQASFAFVDPT
NISTFNNIPGSFEIVNQEGERAELASQAIFNLFFEDLSGNPLILDDVIDLYLPLESGENV
QDRDVKLWRLNTKTGIWEYITQGPGKRRRKRQESARWIGEIDWSIISGNEWLNYDYVYDI
TDNPCYFKIRLFQDETMYSSIVNPEKQIEVTYHILRDNKTTLRTISDYIYYPESDCVIGI
CENETAYITLHYYGRKGYDVLFAGKPELGQSNQYFELMDNNKTLKLQMSSKSIGPFYDGY
SRCSATGKDENHLRYHYGETSEVFTYNKFFSPTQGNIENQILISQRTWFPKRQEGYRVCF
VKVRILVEIEYLSPGQFIKLRATSKGGTNENTHNFTFGIREYKIQNLTDISLCVEYKCSG
TIDPVFQEMDDFTKIELKLFYPESEMTSSVTQEADFLTDFQSLPNVAQIGRTDGIYEIYA
PTVYTPDLGLYSATSDQLDIESATNTAEGECISGTPQNLDDQNPDLGVAVYFSLN
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaacgaaaaataccaagcaaattttagaagtttaacaccgtcctctctagaa
aaggagaggtcatttacaaatataagtagagcgcctgaagatggaacagcagaggtaaaa
ccagctgcatcaccaaatttaaagaatgttgtggtggcgttaattgtagtagtggtaata
gctgttggatgtatagcggcgttggtagttgtattaacaacaaaagatgatggcgaaggc
gaccacacaacagtaccaccaagaacaacaacaactgatcatatgacaacgacaatttca
atacctacaaatcatcaaacaacatcaatagcatcaacatcttcccagacaacaacagga
accattgatggaatatggtcgacatggggagattggacaaaatgtacatcaacgtgcgat
tctggaattcataaaagataccgaaggtgtgaaggacaagactcaaatcaatgtcttgga
gatttcactgagacagaagtctgtgtcgaaatgtcatgcccagagtatggcaaatggaca
acatggggcccatgggaaagttgtggtgtttcatgtggaggaggatttcaatcaagaaca
cgatcttgttccaaggcagaatcttctgatattgattgcattggcacaagcttccaggaa
aagacatgcaacgaatggaaatgtccagtctcatctaaaatgttagactgcagcagagtg
tgtgatgtaggagttctcgatgacgactgtgacatttgcttttgcgatggagaagttgtc
tctggaagggtactagcagtcgataccagcaacccggttagcaatgctgttttctactgg
agttcctcaccgacaaaaaatcttggtgaaagcagctcaactggtcttttcacactcgaa
aatatgtgccctgaatctgaactaatcgtgtcaagaccaggttttgtggatgcagctgtt
ctggttactacttcctatttgttagttaatatgtcaaagacagtttcaccctacttgaca
aagactccgcaatcaaagaacagattagtaggggaagatgtgactttgtgctgtgacgca
gttgctagtccaccaattaattattatgaatggatgaaggatggattaattatagaggaa
accttatacgcagagggaaatcaactgaaattgttcagcttatcaacgactgatagtgga
agctacaagtgcagagccaataccaatgcaggggctattatgtctccgaccgcaacgttg
aatgtcaaagaaatatcaaatgatttttgtatcgacgctttgcaacaaaagactatagcg
ctccccgatgactgtgtgcaaccaaggacaaatacggcaacgtataatgttggtgagtgt
atatcgaaaggttgcagagaaaatacaacctctgaaagcaatgtgtgccatgaagacata
acatcatgttgtacaataggtgatgctgatctcgaaaaggtccaatgttcagattatgaa
ctcgatgttattgtaatacgatcttgtagctgtggagcttgtgcctcgacctccctaacc
gtttttggaacagcacttggattggaggatggatccccactaagatacggcgaagtcttt
gtaaatggtgtatacaaaacctttacaagtaacaccggtacctttagttttgtagcaact
aaggattctccgagaataactttaaacttgagagatgtttatcttaaacaatttcttcca
gctgtcaaggtaattgaaataaacgacaaaatgaatggaaacctacgggtgaaaattaat
atgatcagaacagttaaaccgattgagattgaatcgacaacggaaaacactttaattgca
ggagcatctgcctccaagcccattgtccaagtttcaataccagcaaacgcattttactat
caaaacggtactaagtttgaaggaactgtacaagctagttttgcttttgttgatccaaca
aatatatcgactttcaacaatattccaggttcattcgaaattgtcaatcaagaaggagaa
agggctgaacttgcttcacaggcaatatttaatctcttttttgaagacttatctggaaat
ccgttaattttagatgacgttatcgatttgtatcttccattagaatcaggagaaaacgtt
caggacagagatgtcaaactttggagacttaacactaagactggaatttgggagtacata
acccaaggaccaggaaagagaagacgaaaaaggcaagaatcagcacggtggatcggcgaa
atagactggtcaattatctctggtaacgaatggcttaattacgattatgtttatgatata
accgataacccatgttatttcaaaatcagactttttcaagatgaaacaatgtattcatcc
attgtgaatcctgaaaaacaaatagaagtaacatatcatattcttagagacaataaaaca
actttaagaacaatcagcgattatatttattaccctgaaagtgattgtgtaataggtata
tgtgaaaacgaaactgcatatattacgcttcattactacggaagaaaaggttacgatgtt
ttatttgctggtaaacctgaactaggccaaagtaatcaatattttgaattgatggataat
aataaaacactaaagctacaaatgtcgtccaaaagcattggaccattttatgatggatat
tcacgatgtagcgcaacaggaaaagacgaaaaccacctgagatatcattatggggaaacg
tctgaagtttttacatataataaatttttttctcctacccaaggaaatatagaaaatcaa
atattaataagtcaaagaacctggtttccaaaacggcaagagggctatagagtttgtttt
gtaaaggttcgaattttagtcgaaatagaatatttatcccctggtcagtttattaagtta
agagcaacgagtaaaggtggaacaaatgaaaatactcacaactttacattcggaatacga
gaatacaagatccagaatctaacagacatatcactttgcgtagaatataaatgcagtgga
acaatagaccctgtatttcaggaaatggatgatttcacaaaaatagaattaaaacttttt
tatccagaaagtgaaatgacaagcagcgttacacaagaagcagattttttgaccgatttc
caaagtttgccaaacgtcgcccagattggaagaacagatggaatttatgaaatttacgca
ccgacagtgtatactccagatcttggattatattcagcaacttctgatcaattagatata
gaaagtgctacaaacacagctgaaggtgaatgtatatctggaacaccgcaaaacctagat
gatcaaaacccggatttgggcgttgcagtttatttctctctcaactga
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integrated database retrieval system
