Ruditapes philippinarum (Manila clam): 132721706
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Entry
132721706 CDS
T09557
Name
(RefSeq) serine--tRNA ligase, mitochondrial-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132721706
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132721706
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132721706
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
132721706
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132721706
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132721706
Prokaryotic type
132721706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
132721706
NCBI-ProteinID:
XP_060562046
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MRAVRSACFLLRRNHTLSWSRLRRQIQCLHTSVSCSTESSTSTDAKHDKYNQWNVPFQLK
EPEYDFDYILDPDNLDAIRDNIAQRKGVGNIDLVVDLHRKFVNETNPGEKEKVRREFIQA
VGEIPNISHPHSPVGEEDAAKLVDLVGTKREVTAGQPPLKTMLELGEQLGMLRTSNVAMT
TGHTTYYFLDQFAMLEQALIRYTVDYLLHKGFQLVSVPDLLRPEIIESCGFKTTGDVAQV
YRLDQSRHPDLCLIGTSEMSLAGYFMDEVQKANDLPIKLAAVSRCYRAETSRVEEELGLY
RVHQFTKVEMFGVTGNKTGEEGNELLHELTEIEKTLFSQLDLHFRILDMPTAELGAPAHR
KFDFEAWMPARQFWGEISSASNCTDYQSRRLHIKYRTDNDDDEIRHCTTVSPYVYNISSR
FPKYSP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgtcagatctgcatgttttctgctaaggaggaaccacacattatcatggtca
agactgaggagacaaatacaatgtttacacaccagtgtctcctgtagcactgaatcttcc
acaagcactgatgctaaacatgacaaatataaccagtggaatgtcccttttcagttaaaa
gagccagagtatgattttgactacatattggacccagacaatcttgatgctatcagagat
aacattgcacaaagaaaaggagtgggaaatatagatttagtggttgatctacacagaaag
tttgtcaatgaaacaaatccaggagagaaagagaaagtaaggcgagagtttatacaggct
gtaggagaaataccaaacataagtcacccacattctccagtcggagaagaggatgccgct
aagcttgttgacctggttggaactaaaagagaggtgacagctggtcagccaccattaaaa
acaatgttagaacttggggagcagcttggcatgttaagaacaagcaatgttgctatgaca
acaggacatacaacatactacttcctggatcagtttgccatgttggagcaagctttaata
agatatacagtagattatttactacacaagggtttccagctggtgtctgtacctgacttg
ttacgtcctgaaattattgaaagttgtggttttaagacgacaggtgatgtggcccaggta
tatagacttgaccaatctagacatcctgatctctgtttgataggaacctctgaaatgtcg
ttagcaggatatttcatggatgaagtccagaaagcaaatgatttacctattaagttagct
gctgtaagcaggtgttatagagctgagacatctagagtagaagaggagttaggtctgtat
agagtacatcagttcaccaaggtagaaatgtttggggtgacaggaaacaaaacaggggaa
gaaggcaatgaattgctccatgaacttacagagattgagaaaactttatttagtcaacta
gatttacattttagaatactagatatgcccacggcagagttaggggctcctgcccataga
aagtttgattttgaggcttggatgccagcaaggcagttttggggagagatatcaagtgcc
tctaactgtacagactatcagagtagaagattacatataaaatatagaacagataatgat
gatgatgaaatcagacattgtacaacagtaagtccatatgtctacaatatttcttccaga
tttcccaaatactcaccttag
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