Ruditapes philippinarum (Manila clam): 132721810
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Entry
132721810 CDS
T09557
Name
(RefSeq) Y-box factor homolog
KO
K09276
Y-box-binding protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132721810
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132721810
03041 Spliceosome [BR:
rphi03041
]
132721810
Transcription factors [BR:
rphi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
132721810
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
132721810
mRNA cycle factors
Common to processing body (P body) and stress granule
132721810
Spliceosome [BR:
rphi03041
]
Common components
Common spliceosomal components
General mRNP proteins
132721810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
Motif
Other DBs
NCBI-GeneID:
132721810
NCBI-ProteinID:
XP_060562165
UniProt:
A0A3Q8WIZ0
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MSDSENQPEKQVAVEKKIIATKVSGSVKWFNVKSGYGFINRDDTKEDVFVHQTAIIKNNP
RKYLRSVGDGETVEFDVVEGEKGNEAANVTGPNGTPVQGSKYAADRRRYRRQWYPQRRNQ
DGEGEGGEVRDGGGNRRPRRPYYRNYYPRGGFRGGYRGPPGQMMQGGPMGPPNARRPFYR
RFYRGGPMSGGFGYAPRGYYGPPGGGMYRGRGRGRGGRGRGRGRGGYRRRDENGDNRNEN
SDVHDSGAEDKGE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccgaaaaccaaccggagaagcaggtggcggttgagaagaaaataatagcc
accaaagtcagcggaagtgtaaaatggtttaacgtaaaaagtggatatggctttatcaat
agagatgacaccaaggaagatgtttttgtacaccaaacagccatcattaaaaacaaccca
aggaagtacctgaggagtgtgggtgatggtgaaacagtagaattcgatgtagtagaagga
gagaaaggtaatgaagctgcaaatgtcactggacctaatggcaccccggtccagggcagc
aaatatgctgctgaccgccgccgttaccgtcgtcagtggtacccccagagacgaaaccaa
gatggtgagggtgaaggtggtgaagtaagggatggtggcggtaaccgtcgtccaaggaga
ccatactatcgtaactactacccccgtggtggattcagaggtggctacagaggaccaccc
ggccagatgatgcagggagggccaatgggaccacctaacgccaggagaccgttctatcgc
cgtttctaccgtggaggacctatgagcggtgggttcgggtatgcaccaaggggttactat
ggtccaccaggcggtggcatgtacaggggaagaggtcgtggaaggggagggcgaggacgt
ggccgtggaaggggaggatatagacgcagggacgaaaatggagacaacaggaacgagaac
tccgatgtccatgactctggtgccgaggacaagggtgaataa
DBGET
integrated database retrieval system
