Ruditapes philippinarum (Manila clam): 132721883 Help Entry 132721883         CDS       T09557                                  Name (RefSeq) nuclear RNA export factor 1-like   KO K14284   nuclear RNA export factor Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi03008   Ribosome biogenesis in eukaryotes rphi03013   Nucleocytoplasmic transport rphi03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     132721883    03015 mRNA surveillance pathway     132721883    03008 Ribosome biogenesis in eukaryotes     132721883  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rphi03019]     132721883    03009 Ribosome biogenesis [BR:rphi03009]     132721883 Messenger RNA biogenesis [BR:rphi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      132721883    mRNA cycle factors     Stress granule specific factors      132721883 Ribosome biogenesis [BR:rphi03009]  Eukaryotic type   Pre-60S particles    Export and cytoplasmic maturation factors     132721883 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4 Motif Other DBs NCBI-GeneID:  132721883 NCBI-ProteinID:  XP_060562241 LinkDB All DBs Position Unknown AA seq 657 aa AA seqDB search MAEFRVTTGRDGSRSFGEHDDRWSDDGGSRRSRGRGGYRGNRRSFYNKRTHGFNSYNRRN PSNSFRSRGRGRGGPNPRSRVDDEGDDYMGGDTANQPTQSRYNPYNRPNKGGFHGKNGRY DNSSNNRSANSDALKRLGVPLNDGEPQWFKVLIPWGKRTEKDIILKNIISHVDTPFVPTY FHYEDNAAVFYVNERRTADAIRGITKRITLPNGYKMTIIVKESFPPNIPMGKEEVEKLKV VMSNRYDPTTKALNLSSLHTDTDLCKDNLYMNLARAQVMTNVVQIIKENIPELCCLDMSN NKLVHMDHLAALAPSTSDLKALNLGKNKIAYIDQIGKLKAWKLESLTLDGNPVCDKFNDQ TSYISAIRKVFPKVIKLDGNDLPPPITFDIEARTDLPKSKLNYFPNTEVQGPIVKFLKDY FTVYDSADRTGLSGAYHGNAMFSLSVAYNGAVQYKQSSLGSYIDGSRNLIRQFKDSSKKH KLLKKGSMIIPQLCLLPKTLHDPNTFNVDCNLSSSTMMSFTVQGVFKEVESKQDKQPIRA FSRTFVTVPGGSSMLIVNDMLTITNASPDQIQSAFKTPAPTPSSSPVPQTSPSNPFEGLN LTEVQKQMIVSFMGDSQMNSEWSAKCLAENGWDYAKAGQNFLQLQSEGKIPAEAFKK NT seq 1974 nt NT seq  +upstreamnt  +downstreamnt atggccgaatttcgagtaacaactggaagggacgggtctaggtcgtttggtgagcatgat gacagatggtctgatgatggtggttctaggcgatcgcgtggtcgtggtggttacagagga aatagaaggtcattttacaacaaaagaacacatgggttcaacagttacaacagaagaaat cctagtaattcatttagaagcagaggcaggggaagaggtgggccaaaccctagaagtcgt gtagatgatgaaggagatgattatatgggtggtgatactgctaatcagccaacacagagt agatacaatccatataaccgaccaaataaaggtggtttccatggcaagaatggaagatac gacaacagctctaataatagaagtgcgaattctgatgcattaaaaagacttggagtgcca ttgaatgatggtgagccacaatggttcaaagttttgataccatggggtaaaaggacagag aaagacattattttaaagaatattattagtcatgtggacacgccgtttgtgccaacatat ttccattatgaggacaacgctgcagtgttttatgtaaatgagagacgaacagcagatgct atacgtgggatcactaaaagaattactttaccgaatggatataagatgacgataattgtg aaagaaagttttcctcctaatattcccatggggaaagaagaagtggaaaaattgaaggta gtaatgagcaacagatatgatccgacaacaaaagctctgaatttgagtagtttgcacact gatacagacttgtgtaaagataacttgtatatgaatcttgcaagagcacaagtgatgacc aatgttgtacagatcatcaaagaaaatattccagagttgtgttgtttagacatgagtaac aacaagttggttcacatggatcatttggcagcgctggcaccttcaacaagtgatcttaaa gcacttaaccttgggaaaaataagatagcttacatcgatcaaattggaaaattaaaagca tggaagttagaatccctaacactagatggcaatcctgtatgtgataagttcaatgatcag acatcatacatcagtgcaataagaaaagtatttccaaaagttataaagttggatggtaat gatcttccaccacctataacatttgatattgaagcaaggacagatcttcccaaatcaaag ctaaactactttccaaacactgaagtacagggaccaatagtgaagtttttgaaggattat ttcacagtttatgattctgcagacagaacaggtttatctggggcgtatcatggaaatgct atgttctcattgtctgtggcttacaatggagctgtacagtacaagcaaagttcacttgga agttatatagatgggagtagaaacctaatacggcagtttaaagattcatcgaagaagcac aagttattaaagaaggggagtatgataattccacagctatgtttgttaccaaagacactt catgatcctaacacatttaatgtggactgtaacttaagctcatcaaccatgatgagtttt acagtacaaggcgtgttcaaggaggtggagtccaagcaggataaacagccaatcagagct ttcagtagaacgtttgtcactgtcccaggtggtagcagcatgttgattgtgaatgatatg ttaacgataacaaatgcttcaccagaccaaatacagtcagcatttaagacgccagcacct accccatcatctagtccagtaccacaaacatcaccaagtaatccatttgaagggttaaat cttacagaggtccaaaaacaaatgattgttagctttatgggagattctcagatgaactcg gaatggtcagctaaatgtttagcagagaatggttgggattatgcaaaagccggtcaaaat ttcctccagttacaaagtgaaggaaagattcctgcagaagcatttaagaagtga

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