Ruditapes philippinarum (Manila clam): 132722069
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Entry
132722069 CDS
T09557
Name
(RefSeq) transient-receptor-potential-like protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132722069
Ion channels [BR:
rphi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132722069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank_3
Ank
YVC1_C
Ank_4
Motif
Other DBs
NCBI-GeneID:
132722069
NCBI-ProteinID:
XP_060562474
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MPFTMGKKSTKSRSSRGSSRRSAKVAPIAMPLQPIKCCQRIAPKERLFLEAAERGDKHTM
FRCLHPPSPVNVNCTNMLGRSAIQIAVDNENVEIVELLLKQNGVKIGDALLYAIREGVFK
IVEMLIDHPSITPEMLGTEWYRSKYVGEIGDSEESNDYSPDISPVILAAHCNQFEILQLL
LMRGAVIDRPHQLSCSCRKCQEKVTEDGLRHSLRRINTFRALASPAWISLTSSDPILTAF
KLSWELEKLALRENEFKDAYLALSNQCKKCACDLLDQCRSSEEVIAVLNKGNDSDSDSDE
CDTNADGTMALSRLKLAIKYEQKQFVAHPSCQQLLTSIWYEGLPGWRKRNTISKFTICLG
LCLIMPFMAIYYWTFPLSKIGKLLRTPFMKFLYHSASFVTFLVLLMWASTEISSLKDREN
LRGPPPTTLEWLVCIWVTGFIWSECKQLWEEGLKAYIRQWWNWMDFIMLSLYLTTFTLRF
VAYFQMESGKYGPRSMERKNWPLYDPTMVSEGLFAVANVFSFARIIFLFQADQYLGPLQI
SLGCMLIDIAKFMLIFFLVLTSFACGLNQLYWYYTPDSGNPPSFYTLENSYRTLYWSLFS
LTQLKDIKINNSQYFTETVGELLFMVYHTMAVIVLINMLIAMMSNSFQEIENHADMEWKF
SRSKLWMGYFDEGSTLPPPFNLIISPKSIGYFFRAIKNIFCSCCKKSSFQNIRRKRNKST
EDNIK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccatttacaatggggaagaaatcaacaaagtcaagaagcagtagaggcagctcaaga
cggtccgcaaaagtggcgccaatagccatgcctctacaaccaatcaaatgctgccaaagg
atagcgccaaaagaacggttgtttcttgaagcagccgaacgtggcgataagcacaccatg
ttccgatgtcttcatcctccgtcaccagtaaatgtcaattgtacaaatatgttaggacgg
tcagctattcaaatcgctgttgacaacgaaaatgttgaaattgttgaacttttgttaaaa
caaaatggcgtcaagattggggatgcattattatacgctatccgcgaaggagtatttaaa
attgtggaaatgttaatagaccatccctcaattacaccggaaatgctaggtaccgaatgg
tacaggtcaaagtatgttggagaaatcggtgattcagaagaaagtaatgattactccccg
gacatttctcccgtaattttagcagctcattgcaaccagtttgaaatccttcagcttttg
ctcatgaggggagcggtcattgaccggccccatcaattgtcttgctcatgtcgaaaatgc
caggaaaaagtcactgaagatggtctgcgtcattccttaagacgaatcaacaccttccgt
gctctcgccagtccggcttggatatctttaacgagttctgatccgattcttacggcgttt
aaactttcatgggagcttgaaaaattagcactacgtgagaatgagtttaaagacgcgtat
ttagctctaagcaatcagtgtaagaaatgtgcctgtgatttgttggaccaatgtagaagc
agtgaagaagtcattgcggtgcttaacaaaggaaatgatagcgattctgatagtgatgaa
tgtgacactaatgcggacggtaccatggcgctttccaggcttaaactggccattaaatat
gaacaaaaacagtttgttgcccatccaagttgccagcagttgcttaccagtatttggtac
gagggtctcccagggtggaggaagcgaaacaccatatcgaaattcacaatttgcctcgga
ctatgcctaattatgccatttatggccatctattattggactttcccactcagtaaaata
ggaaagcttttacgaacaccgtttatgaagtttttataccacagtgcatccttcgtgacg
tttctggtattattaatgtgggcgtctacagagatctcgagtctgaaagacagggaaaac
ctacgaggtccaccgccaaccacactagagtggcttgtgtgtatttgggtaacagggttt
atttggtcagaatgtaaacagttatgggaggaaggtctaaaagcctacattcgtcaatgg
tggaactggatggattttatcatgctatccctctatctaacgaccttcaccttgcgcttt
gtcgcgtatttccaaatggagtctgggaaatatggcccgcgttccatggagcgcaagaat
tggccgctttacgatccaacgatggtgtcggagggactatttgcagtggctaacgtgttt
agttttgctagaattatatttcttttccaagctgatcagtacttgggacctcttcagata
tctttgggatgcatgttgatagatattgccaaatttatgttgatattttttcttgtgttg
acttcgtttgcctgtgggcttaaccaactctactggtattacaccccggattctgggaac
ccgccttctttttatactctagagaacagttaccggacattatactggtcactgtttagt
ctgacccaactgaaggacattaagatcaacaacagtcagtattttacagaaactgtagga
gaactactttttatggtgtatcacacaatggcggttattgtcctcatcaacatgcttatt
gcaatgatgtcaaattcattccaagaaattgagaatcatgcagatatggagtggaaattt
tcaaggtcaaagctatggatgggctacttcgacgaaggctcgacacttccgcctcccttt
aacctcataattagcccaaaatctattggatatttcttccgggcaattaaaaatatattt
tgttcatgttgcaagaaatcctcttttcaaaatatcagacgaaaacgaaacaagtctaca
gaagacaatataaag
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