Ruditapes philippinarum (Manila clam): 132722093
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Entry
132722093 CDS
T09557
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132722093
04082 Neuroactive ligand signaling
132722093
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132722093
Ion channels [BR:
rphi04040
]
Ligand-gated channels
GABA-A
132722093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BofA
Motif
Other DBs
NCBI-GeneID:
132722093
NCBI-ProteinID:
XP_060562503
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MCGINTISNQMTVVGFLSLYSASYAITDTSNITEMELITVALEEMLNNYDKRIRPGYGGE
PVDVQLNLNIRSLGPISEMDMAFTMDCYFRQVWTDPRLAMGSSYSNNSKSDEFIQLSIKI
LERIWYPDTVFYNGMKSYLHTITTPNRFIRIYRDGKILFSQRLTVRANCKMELRKYPLDE
QNCPLHIGSFAYSTKDVTYLWRHENPVEMPKDMRLSQFDLLETPFNYTSVNFFKGAWHTV
LSVDFRLSRHLGYFLINVYVPCCLLVILSWVAFWINREATADRIALGTMTVLTMTFLGLE
SRSDLPRVSYTTALDIYIAMAFFFVLATMVQFAAVHNYTKHGYGEPLPQPPEGHVTGDED
EEERENLLPARRPGARTARLKRQRAHRGHSHANGGHHFSRASMKRAASKVWRSLTRLSKK
KEPEDQRNSVSKIDRAARILFPLAFLLFNVLYCLIYYSL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaattaatactatttctaatcaaatgactgttgtcggatttttatctttgtat
agtgccagttatgcaataaccgatacaagtaatatcacagaaatggaacttattaccgta
gcccttgaagagatgttgaataattatgacaagaggatacggcctggatatggaggtgaa
ccagtcgacgtgcagttaaatcttaatatacgatcgctagggcctatatcagaaatggac
atggccttcacaatggactgttacttccgccaagtatggactgatccaagattggcaatg
ggaagttcctatagcaacaattctaaatctgatgaatttattcaattaagcattaagatt
ttagaaagaatttggtacccagacaccgtattttataatggaatgaaatcctatcttcac
accattactactccaaaccgattcatcaggatatacagagatggcaaaattttgttttca
caacgattaaccgttagagcaaattgcaaaatggagcttagaaaatacccgcttgatgaa
cagaactgtccattacatatagggagctttgcatattcaacaaaagatgtaacgtattta
tggcgccatgaaaacccagtggaaatgccaaaggatatgagactgtcgcaatttgatctc
ctagaaacccctttcaattatacgtctgtgaatttctttaaaggtgcatggcatacagta
ctttcagtagattttcgattaagtcgtcaccttgggtattttttaatcaatgtttacgtt
ccgtgctgtttgcttgttatattatcctgggttgccttttggatcaacagagaagccaca
gccgataggatagctcttggtacaatgactgtgttaactatgacatttctgggcctagag
tcgcgtagtgatttgcctagggtgtcctatacaacagccttagacatttatatagccatg
gcctttttctttgttctggcaacaatggttcaatttgctgctgtgcataattatacaaag
catggatatggtgagccacttccacaacctccagaaggtcacgtgactggtgacgaggac
gaagaggaacgggaaaacttgcttcctgcaagaaggccgggggcacgaacagctcgatta
aaacgccaacgtgctcatcgaggacattcacatgcaaacggaggacaccatttttcccgt
gcgtcaatgaaaagagccgcctcaaaagtatggagaagtttaacaagactttctaagaaa
aaggaaccagaggaccaaagaaatagtgttagcaaaatagatagagctgcaaggatatta
tttccattggcttttttattatttaacgtactttattgtctaatatactactcattatag
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