Ruditapes philippinarum (Manila clam): 132722185
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Entry
132722185 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine-protein kinase BAZ1B-like
KO
K11658
bromodomain adjacent to zinc finger domain protein 1B
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132722185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132722185
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromatin remodeling factors
WICH complex
132722185
B-WICH complex
132722185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WAC_Acf1_DNA_bd
PHD
Bromodomain
WSD
PHD-1st_NSD
PHDvar_NSD
WHIM1
PHD_2
zf-HC5HC2H
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
132722185
NCBI-ProteinID:
XP_060562617
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MPLLSKRIFNCVKPLSDVKPEEEIYTIPHTKEQFRSQLEYEKRLHVYEKRIWTCQSTGHV
NLTHEEAWNSEKAVLKTLKEQFAPCYDKPVLELVHHSVKSLDILVDEAWLMLQQVLVVGE
RVLLKVKAGGKSMKAVIVKVDPAGFEGNPTSNCNSPSSDKENKDSNPSSSPKKWVPPKLL
PYMYSIRFENEDSVIHSVPANDLSRGDKPPSKELLRLFIRTYTVRSGYSPNSPWIVDEAQ
VKKLDLQNKYASFLLSPIKWKPDEIAKKIREETKGIKSTGKGSSRIKSKMDAKEEKRKEK
AKRSISKIEKKSEKLKQQKEKQSKKNEVAELDSSDDSSDLESENEEGNENKSVVTEIISD
SDSDTPLSKVKSQLTPQKKSSNTSSPVKSGKNRSLSQTCRKIKKVVNRKSQCPLADLQKQ
LEKKKIKKDKKKSKKGQDPKQLTLIDTLKKKGMKTPEKKSKSPLKTQTSLDMKKKLLSPS
KTPICIEKLQAAIKKKDNPLIGMYALQSAKCLSKTQRDNLKGLCKEHVMKKYNFLQEKRK
IAKMTEEEKKTYLENKARERAKEARKKYKNTMRKFEDTILDLQPLPAPTLVVTPDGLPNE
LFGDIAMVTDFISCYAGLLMPDDEYPIYTDCFMKALASGKDGFTYLCRTLTVLLQTLLQD
QIAEDYEELKVPLSDIPVTPGSCSELVRLCLRRHDMSDSKSDTSENLDDVEECEVPDELL
QLLETQEFYELEPIQKLAIFKGLCERVMGTYSVQYYMEETQQKSTELWKEKFAKIKAKKE
EEKQKKGSEKDGADDKKKENETTDNKKKEKHEKDAPINNMLLTQFYGKTDENAQNNKSPS
SNSETVTEDDDGDLITTIKRRRLTTAQAQEERRKKELEDKIRRQQEEEERQKELFEKNFN
EGIALAKLTLRQTPVGTDRNHSRYWIFCQTTPGVYVEKGWAGDEMEYTVRKDNDDDVDMS
SSSDDESVMEEDAEGTSGPKKKTRHIKMAKCVDTTFPHVGQNLWFTYDKLSKIDDLIETL
HPKGARESVLQRELKKRSDDVYSAIRRYQRQNRNLRDCDGEKEMFKTFKKELLESELRLR
TGGLGGVDDFDTWSVKLETSEDVSTMADCLLESQANVLEKFRDGIMVIKKKKKVESDDIK
EEDEEEEEVKVEAPGIQQWREAVKSSKTMSRLHVLLGILENCVKWEKSAANAKCKICRKK
GEEEKLLLCDDCNQAFHIYCLRPALPCVPKGDWKCIACAPLARKRVIDVPGRYHEDSEDD
AEIKEAKAKSIKHDEACLECGGDESLILCAECPSAYHLECHDPPLRRPPRGRWLCNDCKN
GVKRRTRRGAVTQDARKQGRPASKRKRYVESSDEESSDDESQDNEDNDDYDGETEDEDSK
PPPKKAARTSKGRAGRQSKTTKNSKQDSPKNETSKSRSRRSAPSPEPVYETRPKVSRRAP
SELSLIEDIINKMLAFKAAWPFWHNVSKKDVPDYYNIIKQPISFQKIKDKLNCLVYGSPQ
EVIDDVALVFRNAVEYNKVGSEVYDCIDLSEKKIFLIL
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcctttctaaacggattttcaattgtgttaaacccttgtcggatgttaaacca
gaagaagaaatatataccattccacatacaaaggaacaatttcgttctcaactggaatat
gagaagcgtttgcatgtatatgaaaaaagaatctggacatgccaaagcactggacatgta
aatctcactcacgaggaggcttggaattcagagaaggctgtacttaaaacattgaaggaa
cagtttgcaccatgttatgacaaacccgttcttgaacttgttcatcacagtgtaaagtca
ttggatatattagtagacgaagcatggctaatgttacagcaagtacttgttgttggagag
agagtacttcttaaggtcaaggctggtggaaaatcgatgaaagcagtgattgtgaaggtt
gaccctgcaggatttgagggaaatccaactagtaattgtaactcgccatcaagtgacaaa
gaaaacaaggacagtaacccttcatcgtcacccaaaaaatgggtaccacctaagttgcta
ccatatatgtacagcattaggttcgagaatgaagatagtgttatccattctgttccagca
aatgatttaagtcgtggtgacaaaccaccgtcaaaggaactgttgcggttatttatacgt
acatacactgtcagatcgggttattctcctaacagtccatggattgttgatgaagcccaa
gtaaagaaattggatctacagaacaaatatgctagttttctcttatccccaattaagtgg
aaacctgatgaaattgccaagaaaattagggaggagacaaaaggtatcaagtctactggc
aaaggttcgtcaagaataaagtcaaagatggatgccaaagaggaaaaacgtaaagaaaag
gcaaaaagatcgatctcaaaaattgaaaagaaaagtgaaaaactgaaacaacagaaggaa
aaacaatcgaagaaaaatgaagtggcagaattagattcttcggatgattcctctgatttg
gaatcggaaaatgaggaagggaatgaaaataaaagtgtagtgaccgagattatttcagat
tcagactcagatacaccactgtcaaaagtaaaatctcagttgactcctcagaaaaaatct
agtaatactagtagcccagtgaaatctgggaaaaatcgcagtctctcgcagacttgcaga
aaaattaaaaaagtagtaaatcgaaaaagccaatgtcctttagctgacttacagaagcag
ttggagaagaagaaaatcaagaaagacaagaagaagtctaaaaaggggcaggaccccaaa
caattgacattaatagacactttgaagaagaaagggatgaaaactcctgagaagaagagt
aaaagtccattgaagactcagacatcattggatatgaagaagaagctattgagtccttcc
aagacacctatctgtattgaaaagttgcaggcagcaattaaaaagaaagataatccactt
attggtatgtacgcgttacaatcggcaaaatgtctgagtaaaactcagagggacaatttg
aaaggactttgtaaagaacatgtcatgaaaaaatacaactttttacaggagaagcgaaaa
atagctaaaatgactgaggaggaaaagaagacatatttggaaaataaagcccgagagcgt
gcaaaagaggccaggaaaaaatataaaaacactatgaggaaatttgaggataccatatta
gatttacagccattaccagcaccaacactagttgtaaccccagatggtcttcctaatgaa
ctgtttggagatattgccatggtgacagactttatatcatgctatgctggtctcttgatg
ccggatgatgagtacccaatctacacagattgtttcatgaaagcattagcaagtggtaaa
gatggtttcacatacctatgtcggactctcacagtgttgttacagaccttgttacaggac
cagattgctgaggattatgaagaattgaaagtaccgttgtcagatatcccagttacacca
ggctcgtgctcggaactggtgagattgtgtttaaggaggcatgacatgtcagacagcaag
agtgatactagtgaaaatcttgatgatgttgaagaatgtgaagttcctgatgagttgtta
caactgttggaaacacaagagttctatgaactggaaccaattcaaaaactggctatattt
aaaggactgtgtgagagggtgatgggaacgtactctgtgcagtattacatggaggaaaca
caacaaaagtccactgaactttggaaagaaaagtttgcaaagattaaggccaagaaagaa
gaagagaaacagaaaaagggaagtgagaaagatggtgctgatgataaaaagaaagaaaat
gagaccacagacaataaaaagaaagaaaaacatgaaaaagatgccccaatcaacaatatg
ttactcacccagttttatggtaaaacagatgaaaatgcccaaaataataaatctcctagt
tcaaacagtgaaactgttacggaagatgatgatggggatttaattaccacaataaaaaga
cggcgtttgacaactgctcaagctcaggaagaaagacggaagaaagaattggaagacaaa
ataaggagacaacaggaggaggaagaaagacagaaggagctatttgagaaaaattttaat
gaaggcatagccttggctaaattaacactgcgacaaactccagttggcacagataggaat
cattctagatactggatcttctgtcaaaccaccccaggtgtctatgttgaaaaaggatgg
gctggtgatgagatggaatacacagtgaggaaagacaatgatgatgatgtagatatgtca
agctcttcagacgatgaatctgtgatggaggaagatgccgagggtacatcgggtccaaag
aagaaaaccaggcacataaagatggcaaaatgtgttgatactacatttcctcatgttggt
caaaatctttggtttacatacgacaaactttcaaaaatcgatgacttgattgagacactt
cacccaaaaggggccagggagagtgtgctgcagagggagctgaagaaaagatcggatgat
gtttactcggctattcgcaggtatcaaaggcagaataggaacctgagagactgtgatggt
gaaaaggagatgtttaaaacatttaaaaaggaattgttagaaagtgaactccgactgagg
actggtggcctaggaggtgtggatgactttgatacatggagtgtaaaattagaaacttct
gaagatgtatctactatggctgattgtttattagagtctcaagctaatgtgttagagaag
ttccgtgatggaatcatggtaataaagaaaaagaagaaggtggaaagtgatgatattaaa
gaagaggatgaggaagaagaagaggtgaaagttgaagcccctggtattcagcagtggaga
gaagctgtcaaatcaagcaaaactatgtctcgattacacgtcctgcttggtatacttgaa
aactgtgttaaatgggaaaaatcagcagcaaatgctaaatgtaagatctgtaggaaaaag
ggagaagaagagaagctgttgttatgtgatgattgcaaccaggctttccatatatactgt
ctacgaccagccttaccatgtgtcccaaaaggagactggaagtgtattgcttgtgcaccg
ttggcaaggaaacgagttattgacgtccctggaagatatcatgaagactcagaagacgac
gcggagattaaagaagctaaagcgaaaagtataaaacacgatgaggcatgtttagaatgc
ggtggtgacgagagtttaatactttgtgccgagtgtccttctgcatatcatttagaatgt
cacgatccaccattacgacgcccacccaggggtcgatggctgtgtaatgactgtaagaat
ggcgtaaagagaagaactagaagaggggctgtaactcaagatgcaaggaaacaaggtcgt
ccagcaagcaagcgaaaacgttacgtagaatctagcgatgaggaatcgtcggatgacgaa
tcgcaggacaatgaagacaacgacgattatgatggcgaaactgaggacgaggattcgaaa
cctccaccaaaaaaagctgctcgtacgtcaaagggtagagctggcagacaaagcaaaact
acaaaaaattcaaaacaagattcaccaaaaaatgaaacgagcaaatcaaggagtagaaga
tcggccccatcaccagaacctgtctatgaaacaagaccaaaagtatcgagaagggcccca
tctgaattatcactcattgaagacattatcaacaagatgttggcttttaaagcagcgtgg
ccgttctggcataatgtcagtaagaaagatgtgcctgactactacaatattataaagcaa
cccatcagctttcagaaaattaaagacaaattgaactgtctggtgtacggttcaccacag
gaggttatagacgatgtagctttagtatttagaaatgctgtggaatacaataaggttgga
agtgaggtgtatgactgtatagacttatcagagaaaaaaatttttttgatcttatga
DBGET
integrated database retrieval system
