Ruditapes philippinarum (Manila clam): 132722547
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Entry
132722547 CDS
T09557
Name
(RefSeq) programmed cell death 6-interacting protein-like isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03250
Viral life cycle - HIV-1
rphi03272
Virion - Hepatitis viruses
rphi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132722547
03272 Virion - Hepatitis viruses
132722547
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132722547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132722547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132722547
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
132722547
Exosome [BR:
rphi04147
]
Exosomal proteins
Proteins found in most exosomes
132722547
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
132722547
NCBI-ProteinID:
XP_060563040
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MATFLAVPLKQTYEVDVVKPFRNFIQNTFSSANPDEYNTAISEFHKLRNLTITKSVDKHE
SALEVLYRYYDQLTAIENKLPVAENQIRVQFKWRDAFDKDSLFSGKNTLAIASGAYEKVC
VIFNIGALMSQIAEVQNHESDEGLKTSAKYLQQAAGIFGHLKDTSLSVCSQDPTPDLAPD
TLNALTSLMLAQGQEAVYRKAATSMKEAMVVKIAYQCSDLYADAMKLMQLPSLKELWPRD
WLVSVAMKQAAFHSLAEFYQSVVAQKSKCYGEQISRLKHAKELMAAAATRGGMCFNFKNE
QGKIQRELEAAQKDNDFIYHDKVPDVKTLPALGKLAVAKPLPIPEKFSTSFTDLFEKIVP
IPVYDALNTFEGRKSQVTNMEIGRLREQTTLMNGVLASLNLPAALEDVGGDKVPQSVLDK
AQQIKDMGGLQYLDKLTSDLPELLVRNREILDECIRMLDEEEKSDTQLKEQFKERWTRTP
SASLTKPMREESAKYKNILDTAIGADKIVQEKYNAHKNAMSLLSKPTHEIEKALPSSGSS
GSVSGNPIVKDLKKMMEEVEALKAEREVIENELKESKFDMAGKFMAALAADGVVNEEMIS
SQELDSVYGPLRQQVVDSCQRQDMLLARIQNTNTQFCQSKASNQTGAQREAMLKDLAAGY
DGFMELKGNLEEGTKFYNDLTPLLVRLQNKISDFCFARKTEKDELMADLQKSIARQPTGP
PPSQPQYQQPQSTRQEPPARPPPPNFSTAPTQNPISVPSSTPYPAAPSAPQPGYSGQPDS
QNYVSQTSSSRSRPSVTNTTDSSGASSSWGQPYGQGGYPMPAMPSAGYSSYNPYMGGYQQ
APGYPGAPGQPPYPAAGGQPPYPGQAPPPQGYPYPQQQYPYQQQGYPQQQWR
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcttagcagttccgctaaaacaaacttacgaagttgatgttgttaaaccg
tttcgaaacttcattcaaaatactttttcatctgctaatcctgatgaatacaacacagcg
atcagtgaatttcataaattgagaaatttgacaattacaaagtcggttgacaagcatgaa
tcggcactcgaagttttgtacaggtactatgaccagcttacagctattgaaaacaaactt
cctgtggcagagaatcagatacgtgtgcagtttaagtggagagatgcttttgacaaagat
tccctgttttctggcaagaacacacttgctattgcgtctggagcctatgaaaaggtgtgt
gtgatattcaacattggagctttaatgtcacagattgccgaagtacagaatcatgaaagt
gatgagggtctgaaaacatctgctaaatatttacagcaagctgcaggtatatttgggcac
ttaaaggacacctcattgtcagtgtgtagccaggatcctacccctgacctggccccagac
acgctaaatgccctcacatccctaatgttagctcagggacaggaggccgtgtacaggaaa
gctgctacaagtatgaaggaggcgatggttgtgaaaatagcataccaatgttccgacctg
tatgctgatgccatgaaactgatgcagttaccatctctcaaagaactgtggccaagggat
tggctagtttctgttgctatgaagcaagcagcttttcattctctggcagagttctaccag
tcagttgtggctcagaaatcaaaatgttacggagaacagatttcacgattaaagcatgcc
aaagaattgatggcagctgcagcaaccagagggggcatgtgtttcaatttcaagaatgag
cagggtaaaatacagcgagaacttgaggctgcacagaaagataatgattttatataccac
gataaagtaccggatgttaagacattacctgccctcggtaaactagccgtggccaaacct
ctccctattccagagaaattttcaaccagcttcactgacttgtttgaaaagattgtgcca
attccagtatatgatgcgttgaacacgtttgaaggtagaaaatcacaggtgacaaacatg
gagataggtagattacgagaacagactacattgatgaatggagtattagcatctttaaat
ctgccagcagctctagaagatgtaggcggagataaagtcccacagtctgtgcttgacaaa
gctcagcaaataaaagatatgggcggtctgcagtatcttgataagttaacctcagatttg
cccgaacttctggtcagaaatagagaaatactggatgagtgtatccgtatgttggacgag
gaggagaaatcagacacccaattaaaagaacagtttaaagaacgctggacaagaacaccg
tctgctagccttacaaaaccaatgagagaagaaagtgctaaatataaaaacattctagac
acagcgattggagctgataaaattgttcaagaaaaatacaatgcacacaaaaatgcaatg
tcattgctgtcaaaaccaacacatgaaatagaaaaagcattacctagttctggaagtagt
ggctcagtgtcgggaaatcctatagtaaaagatctaaagaaaatgatggaagaagtggag
gcactcaaagctgaaagggaagttattgaaaatgagctaaaagaatcaaagtttgatatg
gctggaaagtttatggcggcactggctgctgatggtgtagttaatgaggagatgatatca
agtcaagagttagattcagtctatggtcccctcagacaacaggttgttgacagctgtcag
agacaagatatgcttctagctaggatacagaatacaaacacacagttttgtcagagtaaa
gcatccaatcagacgggagcacagagggaagccatgttgaaagatttagctgcgggatat
gacggttttatggaacttaaaggaaatctggaagagggaacaaaattttacaatgattta
acaccattgctggtacggctgcagaacaagatttccgacttctgttttgcacgtaagact
gagaaagatgagcttatggctgacctgcagaagtccatagcacggcaacctactggtccc
ccaccttcacaaccccagtaccagcaaccacaatctacaagacaagagcccccggccagg
ccacctccgcctaatttctcaacggccccaactcaaaaccccatatcagtgccatctagt
acaccctacccagctgcaccaagtgcaccacaaccgggatattccggacaaccagattcc
cagaattatgtgagtcagactagtagctctcgtagcagaccgtctgtgacaaatacgaca
gatagctctggtgcaagttcatcatggggacaaccatatggtcagggaggatatccgatg
cccgccatgccgtctgctggctacagttcttacaatccttatatgggcggataccagcaa
gctccagggtacccaggagcacccggccagccaccatatcctgctgcaggtggtcaacca
ccatatccgggtcaggcaccaccaccccaggggtacccctacccccaacaacaatacccg
taccaacagcaaggttatcctcaacaacagtggagataa
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