KEGG   Ruditapes philippinarum (Manila clam): 132722870
Entry
132722870         CDS       T09557                                 
Name
(RefSeq) uncharacterized protein LOC132722870
  KO
K10840  centrin-2
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    132722870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132722870
   03036 Chromosome and associated proteins [BR:rphi03036]
    132722870
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132722870
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     132722870
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    132722870
   Centrosome duplication proteins
    Centriole replication proteins
     132722870
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      132722870
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EH EF_EFCAB10_C Dockerin_1 SurA_N_3 SurA_N_2 TerB DUF7645 SRI ERAP1_C SPEF2_C SUB1_ProdP9 DUF5580_M MJ1010-like_2nd Mu-like_Pro Ter
Other DBs
NCBI-GeneID: 132722870
NCBI-ProteinID: XP_060563438
LinkDB
Position
Unknown
AA seq 171 aa
MAANYKKTTLAGGGRKKTGPKPELTEEQKQEIREAFDLFDADGSGTIDAKELKVAMRALG
FEPKREEIKKMIAEIDKEGTGTIDFNDFLSIMTTKMSEKDAREEILKAFRLFDDDETGKI
SAKNLRRVAKELGENLTDEELQEMIDEADRDGDGEINQEEFLRIMKKTSLY
NT seq 516 nt   +upstreamnt  +downstreamnt
atggctgcaaattacaaaaagacaacattggctggtggtgggcgtaaaaagacaggacct
aaaccagagttgacagaagaacagaaacaagaaatcagagaagcatttgacctttttgat
gctgatggatcaggaactattgatgccaaagaactcaaagttgccatgagagccctgggc
tttgaaccaaagagagaagagataaagaaaatgattgcagagattgacaaagaaggaaca
ggcacaatagattttaatgactttttgtcaataatgacaaccaagatgagtgagaaggat
gcaagagaagaaatattgaaggcatttagactgtttgatgatgatgaaactggaaaaatc
tcagccaaaaatcttagaagagtagctaaagaattaggcgaaaatctcactgatgaagag
ttacaggaaatgattgacgaggcagaccgagatggtgatggtgaaattaatcaggaagaa
tttttacgcatcatgaagaagacaagtttatactga

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