Ruditapes philippinarum (Manila clam): 132723046
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Entry
132723046 CDS
T09557
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132723046
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132723046
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132723046
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
132723046
mRNA cycle factors
Stress granule specific factors
132723046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
PPO1_KFDV
Motif
Other DBs
NCBI-GeneID:
132723046
NCBI-ProteinID:
XP_060563699
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MKPIVNTTTAASKQNSRSKNSFSGQNVQGQAPVIGTFIPTGPVTIAIPAKTVATAAVSAN
PHHFPSSLSNQNGVSSHVTSSPPQDPPTTSVLTNEQGQETNQQLQGSSSLANTKEKTPMC
LINELARFNRVTHQYTLVDEQGPAHKKTFFVKLQIGDKEEYSASGPSIKKAQHAAAGIAL
EKTEFKHPPPKSRRGEIITEVDDMMSITPTVELNSLAMKRGEPAIYRNIENRNPQPMYYQ
HNYDFRGMYNQRYHYMRPPRSFYVSLKVGTREFIGEGISRQTARHNAAKKALEILRSLKI
PENTEQITQETNFSVEPTKDVPDDDDDTKSEISLVHEIALRHNLPVSFDVIRESGPPHMK
NFVTQCLVGSFKTEAEGNSKKLSKKRAADLMLKELRNLPSLPPNIPRPKTKPPPTKKKNR
NLIKMQKADPTYGVGINPISRLIQIQQAQKKKEPVYTLLAERGLPRRREFVMQVQVDEQT
CTGVGPNKKLAKRHAAEAMLQLLGYNKPSPQPAKPAIKMQGDTSMGEKKVTFSDINDEQ
NT seq
1618 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctattgtaaatacaacaaccgcagcaagtaaacaaaacagcagatcaaaaaat
agtttttcaggacaaaatgtacaaggacaagctcctgtcattggaacattcattcctaca
ggtcctgttactattgcaataccagcaaaaactgtagcaacagccgcagtttcagccaat
cctcatcacttcccttcttcattgtccaatcaaaatggagtttctagtcatgtgaccagc
agtccgccacaagacccacctacaacttcagtattgaccaatgagcaaggccaagaaaca
aatcagcaactgcaaggatcgtctagtttggcaaacactaaagagaaaaccccaatgtgt
ctaatcaatgagttagcccgtttcaacagggtgacccatcagtatacgttagttgacgaa
caaggtccagctcacaagaagacctttttcgtcaagctacagattggtgataaggaggag
tattctgcctcgggtcccagtataaagaaggcccaacatgcagctgctgggatagctcta
gagaaaaccgagttcaagcatccacctcctaaatcaaggagaggggaaatcataactgag
gttgatgatatgatgtctattacaccaacagttgaactcaattctctggcgatgaaaaga
ggagaaccggctatttatagaaacattgaaaacagaaatccacagccaatgtactaccaa
cataactatgacttccggggcatgtacaatcagaggtatcattacatgcgccctcctaga
tcgttctatgtttccctgaaggttgggactcgtgaattcatcggtgagggtatatcaaga
cagacggctagacacaacgctgcgaaaaaagctctagaaatactacgcagtttgaaaata
ccagaaaatacggaacaaattacgcaagaaaccaattttagtgttgaacctacaaaagac
gttcctgatgacgatgatgataccaagtcagagattagtttagtccatgagatagccctc
cgacacaatctacctgtgtcgtttgatgtgatacgagaatccggtccacctcacatgaag
aactttgtaacacagtgccttgtaggaagttttaaaacagaagccgagggtaatagtaaa
aagttgtcaaaaaaacgagctgcagatttaatgctgaaagaattacgaaatctcccatca
ctgcctccaaatataccgagaccgaagacaaaacctccacctacaaagaaaaagaataga
aatctaatcaagatgcagaaagcagatcctacgtatggagtgggcatcaaccctatatcc
cgccttatacagatacaacaagcccagaaaaagaaggagcctgtctacacattactggct
gagagaggtcttcctaggcgtcgtgaatttgtcatgcaggttcaggttgatgagcagact
tgtaccggtgtaggacccaataaaaaacttgcgaagaggcatgctgccgaggccatgtta
cagttgctaggttacaataaaccctcaccacaacctgccaaaccagctattaaaatgcaa
ggagataccagtatgggtgaaaagaaagtaacattttctgatattaatgatgaacaag
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