KEGG   Ruditapes philippinarum (Manila clam): 132723122
Entry
132723122         CDS       T09557                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03020  RNA polymerase
rphi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132723122
  09124 Replication and repair
   03420 Nucleotide excision repair
    132723122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rphi03021]
    132723122
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132723122
Transcription machinery [BR:rphi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     132723122
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132723122
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 CCDC93_CC
Other DBs
NCBI-GeneID: 132723122
NCBI-ProteinID: XP_060563777
LinkDB
Position
Unknown
AA seq 141 aa
MASGTTTSQDQQEEDASELQFPKEFENAETLLVSEVQMLLEHRKTQNESAEEEQELSEVF
MKTLQYTQRFSKFKNRETIAAVRSLLMQKKLHKFELAALANLCPDNAEEAKSLIPSLEGR
FEDEELQQILDDIHTKRSFQY
NT seq 426 nt   +upstreamnt  +downstreamnt
atggcgtcaggcacaacgacttcgcaagaccagcaagaagaagatgcctctgagcttcag
tttccaaaagagtttgaaaatgcggagactttgctggtgtcagaagtacagatgttgtta
gaacacagaaagacccagaatgaaagtgccgaggaggagcaagaactgtccgaggtgttc
atgaaaaccttacaatacacacaacgtttctcaaagttcaagaacagagagaccatagca
gctgtaagaagtttactaatgcagaagaagttacacaagtttgagctggctgcgttagct
aatctgtgtcctgataatgctgaagaggccaagtcactcattccaagtttagagggtaga
tttgaagatgaagaactacaacagattctggatgacattcacaccaagagaagtttccag
tactga

DBGET integrated database retrieval system