Ruditapes philippinarum (Manila clam): 132723200
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Entry
132723200 CDS
T09557
Name
(RefSeq) cysteine desulfurase-like isoform X1
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00730
Thiamine metabolism
rphi01100
Metabolic pathways
rphi01240
Biosynthesis of cofactors
rphi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
132723200
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
132723200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132723200
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132723200
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rphi02048
]
132723200
Enzymes [BR:
rphi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
132723200
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
132723200
Prokaryotic type
132723200
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
132723200
Prokaryotic defense system [BR:
rphi02048
]
DNA phosphothiolation system
Sulfur modification proteins
132723200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Pyridoxal_deC
B12-binding
Motif
Other DBs
NCBI-GeneID:
132723200
NCBI-ProteinID:
XP_060563858
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MFSTICRSGSRAFGLRSSPYYVRMMQIQTHTQNESSDGSPPHKLTDVSNIRKDMPDKELR
PLYLDAQSTTPLDPRVLDAMLPYLVSFYGNPHSRTHAYGWEMEAAVEKARKQVADCIGAD
PREVIFTSGATESNNIIVKGTARFYKSKKKHVITSQTEHKCVLDSCRALEGEGFEITYLP
VQKNGLIDLQELEAAMRPDTVLVSVMTVNNEIGVRQPVEDIGKLCRSKKIFFHTDAAQAV
GKIPLDVDKMNIDLMSISGHKIYGPKGVGAMYVRRRPRVRLEAPMSGGGQEHGMRSGTLP
TPLCVGIGAACELSMQEMEYDHTRISALAKRLIDRVTEKVPHVIRNGDPEKTYPGCVNLS
FAFVEGESLLMALKDIALSSGSACTSASLEPSYVLRAIGADEDLAHSSIRFGIGRFTTQA
EIDYTADKCIEHVTRLREMSPLWEMVQEGIDLKTIKWSQH
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttttctactatttgcagaagtggcagtcgtgcctttggtttaagatcgagtccttac
tatgtccgcatgatgcaaatccaaactcacactcaaaatgaaagttcagatggttcacct
ccacataaattgacagatgtttccaacattcgaaaggatatgccagacaaagagttacgt
cctctttatctagatgctcagtccacaacacctcttgatccaagagtacttgatgcaatg
ctgccatatttagtcagtttctatggcaacccacattcaagaacacatgcttatggatgg
gaaatggaggctgctgttgaaaaagcaaggaagcaagtggcagattgcataggagctgat
ccaagggaggtaatcttcaccagtggagccactgaatctaataatatcatagtgaagggg
acggcacgtttttacaaaagcaaaaagaagcatgttataacctcacagacagagcacaaa
tgtgtgctggattcatgtagagctctagaaggtgaaggtttcgaaatcacatacctgcct
gtacagaaaaatgggctcatcgatttacaggagctggaagctgcaatgagaccagatact
gtgctggtgtcagtgatgactgtcaacaacgaaattggtgtacgtcaacctgtagaggac
atagggaagttgtgcaggtcaaaaaagatatttttccacacagatgctgcacaagctgtc
ggcaagattccactagatgttgataaaatgaatatagatcttatgtctataagtggtcat
aaaatatatggaccaaaaggtgttggagccatgtatgttcggaggagaccaagggtgcgt
cttgaagcaccaatgagtggcggcggccaggaacatggtatgaggagtggcacattaccc
acgccattgtgtgtcggtataggtgccgcgtgtgaactttcaatgcaggaaatggagtat
gatcatacacgtatatcagctcttgctaagaggttaattgacagagttacagaaaaagtt
ccacatgttatacggaatggagatccagaaaagacttacccaggatgtgtgaatttgtca
tttgcgtttgtggaaggtgagagtctactgatggctttaaaagacattgctctttcatct
ggaagtgcttgtacatcagcatctctagaaccatcctatgttttacgtgcaatcggagct
gacgaagatttggctcattcctcaataagatttggtattggaagatttacaacccaagca
gagatagactacacagctgataaatgtattgaacatgtgaccagattaagagaaatgagt
cctttatgggagatggttcaagaaggaatagatttgaagacaataaaatggtcacagcac
tag
DBGET
integrated database retrieval system
