Ruditapes philippinarum (Manila clam): 132723318
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Entry
132723318 CDS
T09557
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132723318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132723318
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132723318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
FapA
DUF4164
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
132723318
NCBI-ProteinID:
XP_060563980
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MFGGAGGGSGGSGGGFSFGTPTTTTGSTGLFGSTPAGGGGGFSFGTPGAAGASTTTATPS
GGFALAGGAPGSTGGSFSFGATATPASMPAGAATSTGTGFSLGQQPASESLGVNLRTSTG
GFNFGGTPGVTPGGTPASTAAAQAFSLAKTTAPTASTAAVGGFNFGGVGSTPTLASSGGL
SLGGAGTTTASGGLLGAPATTSAGNPLLTGLLGTTQAATSATSSAPASGFTLGSVQATTT
TSGFGLKVGTQATTATTSSGLTLGGGGLTLGGAGLKLGVPASATTTASAGGFGFGATATT
TSATSGFGLGTSTTSTAGGFGLGATAGTAKPAVPSLQMNYRQLEDQINKWMTELDEQERL
FLQQATQVNAWDRLLVDNGEKITQLNGDMERVKVDQNKLEQELDYIKTQQKELEDLLCPL
EKSLEQLPSISLQPHADLERENTYQLADNIDAQLKRMVRDLKEIIDHLNTSSSSQDNNDP
ILQITKILNAHMDSLQWIDTNSALLNRRVEDISKQMESQRKDQERNFRLVYD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaggtgcaggaggtggaagcggtggaagcggtggaggctttagttttggtacc
ccaacaactaccactggctccacaggcttgtttggttctacacctgcaggtggtggggga
ggattctcatttggaacaccaggagcagcaggtgcgagtaccaccacagcaactcctagt
ggaggatttgctttagcagggggagcaccaggatcaactggtggaagttttagttttgga
gcaacagctactcctgcttccatgccagcaggtgccgcaactagcacaggaaccggtttt
agtctcggacaacagccagccagtgagtctttaggtgtcaatcttcgtacaagtactgga
ggattcaactttggtggaactcctggtgtaacccctggtggaacccctgcatccacggca
gctgctcaagcatttagtttggcaaaaacaacagctcccacagcttcaacagcagcagtt
ggtggatttaattttggtggtgttgggagcacaccaacactagcatcaagtgggggatta
agtctgggtggtgctggaacaaccacagctagtggaggactgttaggagcccctgctaca
acatctgcaggtaacccattgttaacagggttacttggtactacacaagctgccacatct
gctacttctagtgccccagcatctggtttcactcttggtagtgttcaagctacaacaaca
acatcagggtttggattaaaagttggcacacaggccaccacagcaacaacatcgagtggt
ctcactttaggtggtgggggactaacactaggaggtgcaggtttaaagcttggtgtccca
gcatctgcaactacaacagcttctgctggagggttcgggtttggagcgactgctacaaca
acttcagcaacctcagggttcggtcttggcacatcaacaacttcgacagctggagggttt
ggacttggtgccacagctggtactgcaaagccagctgttcctagtttacagatgaactat
cgacagctagaagatcagataaataaatggatgacagaattagatgagcaggaaagactg
ttcctacagcaagctacccaggttaatgcctgggacagacttttagtagataatggggaa
aagatcactcagttaaatggggatatggagagggtgaaagtagaccagaacaagttagaa
caagaattggactatattaaaacccagcagaaagagttagaagacctattgtgtccacta
gagaagtcattagaacagttaccaagtataagcttacaaccccatgctgatctggaacga
gaaaacacatatcaattagcggacaatattgatgcacagctgaagagaatggtacgagac
ttgaaggagattattgatcatctaaacacatccagtagctcccaggataataatgaccct
atcttacagattacaaagattcttaatgctcatatggattccttacaatggatagatacc
aattcagcattattgaacagaagagtggaagatatcagtaagcagatggaaagtcagagg
aaagaccaagaaagaaactttagactggtgtatgactga
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