Ruditapes philippinarum (Manila clam): 132723470
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Entry
132723470 CDS
T09557
Name
(RefSeq) rab GTPase-activating protein 1-like isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132723470
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
132723470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
Motif
Other DBs
NCBI-GeneID:
132723470
NCBI-ProteinID:
XP_060564175
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MEDAVSRSSLDSSSTGDEYVLVNADPKLRITGDINDLNSEICSENQSRFKQSVNKSMNDS
LVDKEIGHVMPSSQSVDVLNTNGSASNEAEPGAAGSVSLPTTPTGDCIVFHGVTYLGCAT
VNAPRSEVEIYRNMAVLNEQSQGDIPIVLSVPATADGTVSQSEGFVRLLEPGTDTEISSY
KIHRILFCARGPVESNEKRCFAFTFSHGDCADSAIFQCHVFRCDLSEAVAKILYCFANTF
RRVPKNRSSVSKPILESNQDFVFTVNLEMREEDGKGGFTLCPRDKNVFKLRCNLDKRLAL
TVQQSGSKELKIERCFGLLISPGRNVKHGDMTLIEKTSMGYAGEDGVYSITGHWDPTESS
FAVLNTETQKDTRVFLTVAIDLVIIGIQEPVRFAIETKAKIFPQTERFWYFMSKPHTELF
HVKLKPIESSNGDISHEVVSVTSQTELDRKKGGMSLPLGQSKYVRDDILTPQDGPDEESD
TDEPLLSGSGVVSKEITDENILEAWKDVLKRWHQNLSQKPKQVNQLAKKGIPEALRGEVW
QLLAGCETNHELLEAYRILITKDSSSEAVIQRDINRTFPAHDFFKESGGLGQESLFKICK
AYSVYDEEIEYCQGQSFLAAALLLHMPEEQAFSVLVKIMFDYGLRDFFRNDFNVLHLHFY
QLERLLQDQLVDIFDHFMEMGVEAHMYASQWFLTLFTAKFPLFMVFHILDIFLSEGRNFI
FNVALALLKVSRKDLLALDFEGVLKYFRVQLPKKFRTEEATGDLMQTAVSCKVNARKLKK
YEKEYLAMKEEELQKEDPVERLERENKRLMEANIRLEQENDDMAHELVESKLNLTKKLDL
CQDTSEALTSELMQTKKRLVETEEEKQRLELESQQVKEMCRRELERLEADNSRNTVIIAD
YKQICSQLSERLEKQQTAAKKELEAIRGQVKSCEHCSAMFDPEGKVQVPEPKVDPESLNP
RIMELERLVRELELELAQTKLAHVESECKTQDLTHQLNSAVSEIQASKNTWFTKTINSIK
EVATTQKKDSKDLQRKDSTSKE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgctgtaagtagaagttccctggactcatcatcaacaggggatgaatatgtg
cttgtcaatgctgaccccaagttaagaattacaggtgacatcaatgatctaaacagtgaa
atctgttccgagaaccagtctagattcaaacaatctgtcaataaaagtatgaatgacagt
ctcgttgataaagagattggtcatgtgatgccaagtagccaatcagttgatgtgttaaat
acaaatggatcagcaagtaatgaggctgagccaggggcagcagggtctgtttctcttcca
acaactccaactggtgattgtatagtatttcatggagttacttacttgggttgtgctaca
gttaatgctccacgaagtgaggtggaaatatatcgcaatatggctgtcctgaatgagcag
tcacaaggagacattccaatagttctctctgtacctgccacagcagatggcactgtaagt
caatccgaaggatttgttaggttgctagagccgggaactgacacagagatttccagttac
aaaatacaccgtatcttgttctgtgcccggggaccagtagagagtaatgagaaacgatgc
tttgctttcacatttagccatggtgattgtgctgactcagccatttttcagtgccatgtg
ttcagatgtgatctttctgaagctgttgctaagatactgtattgttttgctaatacattc
cgtagagtgccaaagaatcgatcaagtgtatcaaaaccaattctagagtcaaatcaagac
tttgtgtttactgtgaatttggagatgagagaggaagatgggaaaggagggtttactctc
tgtcctagagacaaaaatgttttcaagttacgatgtaatcttgataaaagactcgcatta
actgttcaacaaagtggatcaaaggaactaaaaattgagagatgttttggtctgctgatc
agtccaggaagaaatgtcaaacacggagacatgactcttattgaaaagacatctatggga
tatgctggtgaagatggtgtctattctataactggtcactgggatccaacagagagcagt
tttgctgtactaaacactgaaacacaaaaagatacacgagtgtttttgacagttgccata
gatctagtcataataggaatacaagagcctgtgagatttgctattgaaacaaaagcaaag
atatttccacagactgagagattttggtacttcatgagtaaaccccatacagagctcttc
catgttaaattaaagccgattgagagcagtaatggagacattagccatgaagttgttagt
gtaactagtcagacagagttagatagaaagaaagggggaatgtctttaccgttaggtcaa
tccaaatatgtacgtgatgatatactgacacctcaagatggaccagatgaagaatcagat
acagatgagccattgttaagtggatcaggggtagttagtaaggagattactgatgaaaat
atcctggaagcctggaaagatgttctcaaacgatggcatcaaaatctgtcccaaaaacca
aaacaggtaaaccaattggcaaagaagggaattcctgaagctctaagaggagaggtatgg
caactgctggcaggttgcgaaacaaatcatgaattattagaggcctacaggatacttata
actaaggactcaagcagtgaagctgtgatacagagggatattaacagaacatttccagcc
catgatttctttaaagaaagtggtggccttgggcaagaatctttgtttaagatatgcaag
gcatattcagtttatgatgaagagatagagtattgtcaaggtcagtcattcctagctgct
gctctcctgttacatatgcctgaggagcaagcattcagtgttttagtgaagattatgttt
gactatggactaagagacttctttagaaatgacttcaatgttctacatctgcacttttat
caattagaacgtctcttacaggaccagttagttgatatatttgatcatttcatggagatg
ggagtagaggctcacatgtatgcttcacagtggtttctcacattgtttacagccaagttt
ccactcttcatggtcttccacattctagatatcttccttagtgagggccgtaactttatc
ttcaatgtggcgcttgccttgctgaaggtttcaagaaaggatttgcttgcattggacttt
gaaggtgttcttaaatatttccgtgttcaactacctaagaaattccgtactgaagaggct
acaggagatttgatgcagactgcagtaagctgtaaggtaaatgcacgtaaactgaaaaag
tacgagaaggaatatcttgccatgaaggaggaggagctacagaaggaagacccagtagaa
aggcttgagcgtgagaataaaagattaatggaggcaaatattcgtcttgagcaggagaat
gatgatatggcacatgaactggtggagagtaaacttaatcttaccaagaaacttgatttg
tgccaagatacgagtgaagctttaacatcggagctaatgcagacaaagaaacgtttggta
gaaactgaagaggagaaacaaagattggagctagaatcacaacaggttaaggagatgtgt
agaagggagttagagaggttggaagcagacaacagtcgtaatacagtcatcatagccgac
tataaacagatttgttctcaacttagtgaacgccttgagaagcaacaaacagcagccaag
aaggaattagaagcaataaggggtcaagtgaaatcttgtgagcattgttcagccatgttt
gatcccgaaggtaaagttcaagtccctgagccgaaagttgatccagaaagtctcaacccg
cgtatcatggaacttgaaagacttgttcgtgaactggaacttgagcttgctcagacaaag
ctggcgcatgtagagtcagaatgtaaaacacaagacttgactcatcagttaaactctgct
gtctcagaaatccaagcatctaaaaatacctggtttaccaaaacaatcaattccataaag
gaagtagcaactacgcaaaagaaagattcaaaggatttacagcgaaaagattccacatca
aaagaatga
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